Hydrogenibacillus sp. N12: K2M58_10215
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Entry
K2M58_10215 CDS
T07426
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hyi
Hydrogenibacillus sp. N12
Pathway
hyi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K2M58_10215 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyi03400
]
K2M58_10215 (mutM)
Enzymes [BR:
hyi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K2M58_10215 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K2M58_10215 (mutM)
DNA repair and recombination proteins [BR:
hyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K2M58_10215 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
DUF7351
DUF7573
Zn_ribbon_IS1595
NFACT_N
Auto_anti-p27
DUF7577
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QZA32643
LinkDB
All DBs
Position
complement(2176057..2177019)
Genome browser
AA seq
320 aa
AA seq
DB search
MPELPEVETVRRGLQSSLSGRRIVAVDVRLPRLIRSPEPEAFCRRLVGRTFGRIGRRGKY
LLLALSPDVLVVHLRMEGKFDLVPAGTPEPPHVHVVFHLDDGRELRYRDVRQFGTFDLVP
EAHLAAFPPLAALGPDALDPAWDLPALLARLGRHRRRPIKALLLDQTIVAGIGNIYADEA
LFRAGIHPRRPAGSLRPDEAAALWSAVRGVLADGIARGGASVRSYRGPNDALGYFQLALA
VYGREGEPCPRCGTAIERTVVAGRGSRFCPRCQPEVGAENGRAPSASTERPPASAAWALA
VRRSSRQSAAAAAPAGEGRR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttccggaagtcgagacggtccgccgggggcttcagtcgtcgctttccggg
cggcgcatcgtggcggtcgacgtccgcctgccgcgcctcatccgctcgccggaacccgag
gcgttttgccggcgcctggtcggccggaccttcgggcggatcggccggcgggggaagtac
ctgcttctggccctttcgcccgacgtcctcgtcgttcacctccggatggagggaaaattc
gacctcgtcccggccgggacgccggagccccctcacgtccacgtcgtcttccacctcgac
gacggccgggagcttcgctatcgggacgtgcggcagttcggcacgttcgacctcgtgccg
gaggcgcatctcgccgcctttccgcctttggccgcccttggcccggacgccctcgatccg
gcctgggacctgccggcgcttctcgcccgcctcgggcggcaccggcgccggccgatcaag
gcgctcctcctcgaccagacgatcgtcgccggcatcggcaacatctacgccgacgaggcg
cttttccgggcgggaatccacccccggcgccctgccgggagcctccggccggacgaggcg
gcggccctctggtccgccgtccggggcgtcctcgcagacggcatcgcccggggcggcgcg
agcgtccggtcgtaccggggcccgaacgacgccctcggctattttcagctggcgcttgcc
gtctacggccgggaaggcgagccgtgcccgcgctgcgggaccgcgatcgaacggacggtc
gtcgccggccggggaagccgcttttgcccccgctgtcagccggaggtcggcgccgaaaac
ggaagggccccgtccgcctcgaccgaaaggccgccggcttcggccgcctgggcgctcgcc
gttcgccgttcgtcccgccagtcggcggccgcggcggcgcccgccggggagggccggcga
tga
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