Hydrogenibacillus sp. N12: K2M58_10220
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Entry
K2M58_10220 CDS
T07426
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hyi
Hydrogenibacillus sp. N12
Pathway
hyi03030
DNA replication
hyi03410
Base excision repair
hyi03420
Nucleotide excision repair
hyi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K2M58_10220 (polA)
03410 Base excision repair
K2M58_10220 (polA)
03420 Nucleotide excision repair
K2M58_10220 (polA)
03440 Homologous recombination
K2M58_10220 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyi03032
]
K2M58_10220 (polA)
03400 DNA repair and recombination proteins [BR:
hyi03400
]
K2M58_10220 (polA)
Enzymes [BR:
hyi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K2M58_10220 (polA)
DNA replication proteins [BR:
hyi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K2M58_10220 (polA)
DNA repair and recombination proteins [BR:
hyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K2M58_10220 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K2M58_10220 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QZA34290
LinkDB
All DBs
Position
complement(2177220..2180000)
Genome browser
AA seq
926 aa
AA seq
DB search
MQTAADRGPAVPAGAGTLLLIDGSSVAHRAFYALPALTDAGGRPTNAVYGFALMLLKLLE
DDPPTHLAVVFDAGKTVFRHALYAEYKGTREKSPPELVEQLPLVRALVGAFGLPLIEREG
YEADDLIGTLADRAARSGYAVRILSSDRDLLQLLGPRVSVGLTRKGVTEIDWMTEDAFRA
AYGIAPAQFVDVKALMGDASDNIPGVPGVGEKTALKLIAEYGTLDGVYAHLAEIRGKLRE
RLEAHREAAYLSRKLAAIERGVPLDVEPDALRLRPPKAAALEAFFRDVGFRSLLDRVRRL
AAPEAEPAAAEASPPDEAPPTDAASPPVEAPGAKVGSVRVLGAAAAEAPDVLEGAEAAEA
AAAHLPRPAALVLELDGENPHRARIAGGAIAGDGRLVAFSPAALAAPAFRRWLEDPAVEK
IAYDAKRTFVALARVGLRPAGIADDLLLMQYLLDATRGSYTLADLARSHGLELPDDEAVY
GKGARFRLPPPERLYPHLAAKARALAAVRGPTAKRLQALGMTTLYREVELPLAFVLAEME
LAGVAVDRAALEAYGAELDAKIAAVAEEIFRAVGVRFNLNSPKQLGEILFDKLGIPPLKK
TKTGYSTDAETLEKLAPYHPVIPKLLDYRLLTKLRSTYIDGLVAAIHDDGKIHTTFHQAL
TATGRLSSSDPNLQNIPVRVEEGRKIRKAFVPSEAGFLILSADYSQIELRVLAHFSGDPK
LVDAFHRDEDIHTQTAMDVFGLSREAVTPLHRRQAKAVNFGIIYGISDYGLSQNLGIGRK
EAAAFIERYFATYPDVKRYLDEAVARARERGYVETLLGRRRELSEIRDKNFARRSFAERA
AMNTPIQGTAADIIKKAMLDVDRALRSAGLRARMLLQVHDELVFEVAEADAPALADLVKE
RMEQAARLRVPLKVDVAVGPTWYDAK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
attcagacggccgccgatcgcggtcccgccgtcccggccggcgcaggcacgcttctcctc
atcgacggctcgagcgtcgcccaccgggcgttttacgccctcccggccctcaccgatgcc
ggcggccgaccgacgaacgccgtctacgggtttgctctcatgctcttgaagctcctcgaa
gacgatccgccgacccatctcgccgtcgtcttcgacgccgggaagacggtcttccgccac
gccctgtacgccgagtacaagggcacccgggagaaaagcccgccggagctcgtcgaacag
cttcccctcgtccgggcgctcgtcggcgccttcggccttccgctcatcgagcgggaaggc
tacgaagccgacgacctcatcggcaccctcgccgatcgggcggcccgatccggctacgcc
gtccgcatcctctcgagcgaccgggaccttctgcagctcctcggcccccgcgtctccgtg
gggctgacgcggaagggcgtgacggagatcgactggatgacggaagacgccttccgagcg
gcgtacgggatcgcgccggcgcagttcgtcgacgtcaaggcgctcatgggcgacgcctcc
gacaacatcccgggcgtccccggcgtcggggaaaagacggccttaaagctcatcgccgaa
tacggcaccctcgacggcgtctacgcgcacctggccgagatccgcggcaagctccgggag
cggctggaggcgcaccgggaggcggcgtatttgagccggaagctcgccgcgatcgagcgc
ggcgtcccgctggacgtcgagccggacgcgctccggcttcgcccgccgaaggcggcggcc
ctcgaggcctttttccgggacgtcggcttccgctcgctccttgaccgggtccggcgcctg
gcggcgccggaggcggagcctgcggcggcggaggcgtctccgccggacgaggcgcctccg
acggatgcggcgtctccgccggtcgaggcgcccggggcgaaggtcggatcggtccgggtg
cttggggcggcggcggccgaggcgccggacgtcctcgaaggcgccgaggcggcggaggcg
gccgcggcgcatcttccgcggccggcggccctcgtcctcgagctcgacggcgaaaacccc
caccgggcccggatcgccggcggcgcgatcgccggggacggtcgcctcgtcgccttttcg
ccggcggcgctcgccgcgccggcctttcgccgctggctggaagacccggcggtcgagaag
atcgcctacgacgcgaagcggaccttcgtcgcccttgcccgggtcgggcttcggccggcg
gggatcgccgacgacctcctcctcatgcaatatctcctcgatgcgacccggggctcgtac
acccttgcggacctcgcccgatcccacgggctcgagcttccggacgacgaagcggtctac
ggcaagggggcccgtttccggctgccgccgccggagcggctttatccgcatcttgcggcc
aaggcgcgggcgctggcggcggttcgggggccgaccgccaagcgccttcaggccctcggc
atgacgaccctctaccgggaggtcgaactccccctcgccttcgtcctcgcggagatggag
ctcgccggcgtcgccgtcgaccgggcggccctcgaggcgtacggcgccgagctcgatgcc
aagatcgccgccgtggcggaagagatcttccgcgccgtcggcgtccgcttcaacctgaac
tcgccgaagcagctcggcgagatcctgttcgacaagctcggcatcccgcccctcaaaaag
acgaagacgggctattccaccgacgccgagacgctggagaagctcgccccgtaccatccc
gtcatcccgaagctcctcgactaccggttgctcacgaagctccgctcgacgtacatcgac
gggctcgtcgcggcgatccacgacgacggcaaaatccacacgacgttccaccaggccctc
accgccaccggccggctttcgtccagcgacccgaacctccagaacatccccgttcgggtc
gaggaaggccgaaagatccggaaggcgttcgtcccgtcggaagccggttttctcatcctt
tcggcggactactcccagatcgagctccgggtgctcgcccacttctccggcgacccgaag
ctcgtcgacgccttccaccgggacgaagacatccacacccagacggcgatggacgtcttc
ggcctttcccgggaagcggtcacgccgcttcaccgccggcaggcgaaggcggtcaacttc
ggcatcatctacggcatcagcgactacggcctctcccagaacctcgggatcggccggaaa
gaggcggcggcgttcatcgagcggtacttcgccacgtatccggacgtcaagcgctacctc
gacgaagcggtcgcccgggctcgggagcggggctacgtcgagacgctgctcggccggcgg
cgggagctttcagagattcgggacaaaaactttgcccgccggagttttgccgaacgggcg
gcgatgaacacgcccatccaggggacggccgccgacatcatcaaaaaggcgatgctcgac
gtcgatcgggccctccgctcggcgggccttcgggcccgaatgctgcttcaggttcacgac
gagctcgtcttcgaggtggccgaggcggatgcgccggccctcgccgacctggtgaaggaa
cggatggagcaggcggcccgccttcgggtccccctcaaggtcgatgtcgccgtcggcccg
acgtggtacgacgccaaatga
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