Hydrogenibacillus sp. N12: K2M58_10285
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Entry
K2M58_10285 CDS
T07426
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hyi
Hydrogenibacillus sp. N12
Pathway
hyi03030
DNA replication
hyi03430
Mismatch repair
hyi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K2M58_10285 (dnaE)
03430 Mismatch repair
K2M58_10285 (dnaE)
03440 Homologous recombination
K2M58_10285 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyi03032
]
K2M58_10285 (dnaE)
03400 DNA repair and recombination proteins [BR:
hyi03400
]
K2M58_10285 (dnaE)
Enzymes [BR:
hyi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K2M58_10285 (dnaE)
DNA replication proteins [BR:
hyi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K2M58_10285 (dnaE)
DNA repair and recombination proteins [BR:
hyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K2M58_10285 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QZA32653
LinkDB
All DBs
Position
complement(2194176..2197607)
Genome browser
AA seq
1143 aa
AA seq
DB search
MSTFVHLHVHTEYSLLQSTVRVGALPEAVRARGMSAVAITDHGVLSGWVPFVHACRAAGI
KPILGMELAVALDDGETAHVVLLADGEAGYRSLVRLSTLAQLHPATDRPSVTKAALADHA
EGLVALSGGPEGEVGRLLLKGDLPRAAQAALWYRNVFGPDGFYLELTDHGTPEEQKLIAY
SVELGRRLGLPLVATNDVRYLDEAEAPVVDVLLAIAAGTKLADPLRPRLPGRGYDLAAPE
AFFGRRAWPKEALQNAVRLAERLSAYLPDGTPKLPRFPVPPEDGRDAAGLLRTLAEEGLR
RRFGAPSAAARARLDHELDVIVRMGLSDYFLIVADVVAYARRRGIAVGPGRGSAAGSLVA
YALGITDVDPLRYDLLFERFLNPERKSLPDIDIDFADDRREEVLAYVREKYGADRVAGIG
TFGTMAARMSLRDAGRALGLSPTDIDRLAKRIPAQPGATLEAALRDDPALRAEGEKNPDI
RRLFDIARRIEGLPRHVSTHAAGIVLAPEPLDGLVPLFPGAGGAVTQFPMEDLERLGLVK
MDFLGLRNLSLLDRTVRSLSRAGVAEIDLRTLSLDDAETYRMLARGETDGVFQLESPGMR
RLLVELRPSAFDDIVAAIALYRPGPMDQIPAYLRAKRRPEAVRYPHPALRPILEPTYGVI
VYQEQIMRIAEALAGYTLGEADLLRRAVAKKDRSALEGERARFVERAVGRGVPKAEAEAV
YDLIVRFADYGFNKSHAVAYALIAYQTAYLKAHHPLYFYTELLNSVIGDADKTAAYLDAA
RRAGIRLLGPDINASAALFRVEGPWIRFGLLPVKNVGRQAAEAIERARADGPFRSLVDFL
VRVDARAVSRRVVEALIVAGAFDALAGGRANRAKLLAGLDEAYRRADALRETAGQGALFA
DDGAPEEAFEAARAVDPYSPEELARLEREVLGVVLGEHPLHRFMPVLRHPSVTRLAALST
HRPDERVRVAAELVAVRPRTTRRGEPMASLLLDDLTARLWAVVFPEAYRLLREALRPGAL
YLFRGRVLHDGEAVRLAVEDARPLDDVARRLALSAAAGEGRRAVFVRVREADRVTGKLEA
LRRLLLDHPGESPVFLVDERRGVRMLPERYAVTPSLTFLKAVRALFGPDGVALRPAPDDA
GRR
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacgtttgtgcatctccacgtccacacggaatacagcctgctccagagcaccgtc
cgcgtcggggcgctcccggaagccgtccgggctcgagggatgagcgccgtcgccatcacc
gaccatggggtcctctccggctgggtgccgttcgtccacgcctgccgggcggccggcata
aagccgatcctcgggatggagcttgcggtggcgctcgacgacggcgagacggcccacgtc
gtccttctcgccgacggcgaagcgggctaccgctccctcgtccgcctgtcgaccctcgcc
caactccatccggcaaccgaccggccgagcgtgacgaaagcggcgcttgccgaccacgcc
gaggggctcgtcgctttaagcggcggaccggagggggaggttggccggcttctcttgaag
ggcgacctcccccgggcggcccaggcggccctctggtaccggaacgtcttcggccccgac
ggcttttacctcgagcttacggaccacggcacgccggaagaacaaaagctcatcgcctac
agcgtcgagctcggccggcgcctcggcctccccctcgtggcgacgaacgacgtccggtat
cttgacgaggcggaagcgccggtcgtcgacgtgcttctggccatcgccgccgggacgaag
ctcgccgacccgcttcggccgcggcttcccggccggggctacgacctcgccgcgccggag
gcgtttttcggccggcgggcctggccgaaggaggcgcttcaaaacgccgtccgcctcgcg
gagcggctttcggcgtatcttccggatggaacgccgaaactcccgcggtttcccgtgccg
ccggaagacggccgggacgcggccggactgcttcggacgctggcggaagaaggcctccgg
cgccgctttggcgcgccgtccgccgcggcccgggcgcgcctcgaccacgagctggacgtc
atcgtccggatggggttgagcgactacttcctcatcgtcgccgacgtcgtcgcgtacgcc
cggcgccgggggatcgccgtcgggcccgggcgcggctcggccgccgggagcctcgtcgcc
tacgccctcggcatcaccgacgtcgatcccctccggtatgacctcctcttcgagcgcttt
ttgaacccggagcgcaaaagcctcccggacatcgacatcgacttcgccgacgaccggcgg
gaagaggtgctcgcctacgtccgggaaaaatacggcgccgaccgcgtcgccggcatcggc
acgttcggcacgatggcggcccggatgagcctcagggacgccggaagggcgctcggcctt
tcgccgacggacatcgaccggctggcgaagcgcatcccggcgcagccgggggcgacgctc
gaggcggccctccgggacgatccggccctccgggcggaaggggaaaaaaatccggacatc
cggaggcttttcgacatcgcccgccggatcgaagggctgccgcggcacgtctcgacccac
gccgccggcatcgttctcgcgccggagccgctggacggcctcgtgccgcttttccccggc
gccggcggcgcggtgacgcagtttccgatggaagacttagagcgcctcggcctcgtcaag
atggacttcctcggcctccggaacctctccctcctcgaccggaccgtccggtcgctctcc
cgcgccggcgtcgccgagatcgacctccggacgctttccctcgacgatgcggagacgtac
cggatgctcgcgcggggggagacggacggcgtctttcagctggagtcgccggggatgcgg
cggctcctcgtcgagcttcggccgagcgccttcgacgacatcgtcgccgccatcgccctt
taccggccgggcccgatggaccagattccggcgtaccttcgggcgaagcgccgcccggag
gcggtccgctatccccacccggcccttcggccgatcctcgagccgacgtacggcgtcatc
gtctaccaggagcagatcatgcggatcgccgaggccctcgccggctacaccctcggcgag
gcggatcttctccggcgggcggtggcgaaaaaagaccgctccgccctcgaaggagagcgg
gcgcggtttgtcgagcgggccgtcgggcggggggtgccgaaggccgaggcggaggccgtc
tacgacctcatcgtccgcttcgccgactacggcttcaacaaaagccacgccgtcgcctac
gccctcatcgcctatcagacggcgtacttgaaggcccaccatccgctgtatttttacacc
gaacttttaaacagcgtcatcggcgacgccgacaagacggccgcctatctcgacgccgcc
cgccgggcagggatccggctcctcgggccggacatcaacgcctccgccgccctctttcgc
gtcgaaggcccgtggatccgcttcggccttctgcccgtcaaaaacgtcggccggcaggcg
gcggaggcgatcgagcgggcccgggcggacgggccgtttcgctccctcgtcgacttcctc
gtccgggtcgatgcccgggccgtaagccgccgggtcgtcgaggccctcatcgtcgccggg
gccttcgacgccctcgccggcggccgggccaaccgggcgaagctcctcgccggcctcgat
gaagcgtaccgccgggcggacgccctccgcgagaccgccgggcagggggcgctgtttgcc
gacgacggggcgccggaagaggcgttcgaggccgcccgggcggtcgatccgtattccccc
gaggaactcgcccgcctcgagcgggaggtcctcggcgtcgtcctcggcgagcacccgctt
catcgctttatgcccgttctccggcatccgtcggtgacgcgtctcgcggccctctccacc
caccggccggacgaacgggtccgcgtcgccgccgagctcgtcgccgtccggccccggacg
acccgccgcggcgaaccgatggcgtccttgcttctcgacgacttgaccgcccgcctgtgg
gccgtcgtctttccggaggcgtaccggttgctccgggaggcgctccggcccggggcgctc
tacctcttccgggggagggtgctccacgacggcgaggccgtccggcttgccgtcgaggac
gcccgtcccctcgacgacgtcgcgcggcgcctcgccctgtctgccgccgccggcgagggc
cggcgggcggtgttcgtccgggtgcgggaggcggatcgcgtcaccggcaagctcgaggcg
ctccggcggcttcttctcgaccatcccggggaaagccccgttttcctcgtcgacgagcgc
cggggcgtccggatgctccccgagcggtacgccgtgacgccctctttgacctttttaaag
gccgtccgggccctcttcggcccggacggcgtcgcccttcgcccggcgccggacgacgcc
gggcgccggtaa
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