Hydrogenibacillus sp. N12: K2M58_11100
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Entry
K2M58_11100 CDS
T07426
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hyi
Hydrogenibacillus sp. N12
Pathway
hyi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K2M58_11100 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyi03400
]
K2M58_11100 (uvrB)
DNA repair and recombination proteins [BR:
hyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K2M58_11100 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K2M58_11100 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_19
AAA_30
AAA_16
AAA_25
AAA_22
Mal_decarbox_Al
AAA
DUF1131
Motif
Other DBs
NCBI-ProteinID:
QZA32787
LinkDB
All DBs
Position
complement(2360775..2362811)
Genome browser
AA seq
678 aa
AA seq
DB search
MATATGRRFELVAPYEPRGDQPKAIRALVEGIRAGKRFQTLLGATGTGKTFTIAHVIAEV
QKPTLVIAHNKTLAGQLANEFRAFFPHNAVEYFVSYYDYYQPEAYVPETDTYIEKDASIN
DEIDKLRHSATSALFERQDVIIVASVSAIYGLGDPAEYRDLVLSLRVGMEKPRDEVLRKL
VDIQYTRNDYDFHRGTFRVRGDVVEIFPASRSEQAIRVEFFGDEIERIAEIDVLTGEITG
FREHVAIFPASHYVTRRETLERAIRSIEGELEERLGELRAAGKLLEAQRLEQRTRYDIEM
LRELGYCPGIENYSRHLTGRAPGEPPYTLLDYFPDDFLLVIDESHVTIPQLRGMYNGDMS
RKLTLIEHGFRLPSAADNRPLKFEEFEARIRQAIFVSATPGPYELEKAPDVVEQIIRPTG
LVDPEVVVRPTAGQIDDLVEEIRLRIERDERVLVTTLTKRMAEDLTDYLKELGIKVRYMH
SDIQTIERLALIRDLRLGVFHVLVGINLLREGLDIPEVSLVAILDADKEGFLRSETSLIQ
TIGRAARNANGKVILYADRITEAMRRAIDETERRRRIQLAYNEAHGITPETVRKKVHDVI
EATRAKEPKTDYIAEIRRAKTAEAREKLIARLEREMKEAADALLFERAAELRDLIIELKG
EGAWRKTKSSSKGHASTI
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgaccggccgccggtttgagctcgtggcgccttacgagccgcgcggcgat
cagccgaaggcgatccgggccctcgtcgaggggatccgggccggcaagcggtttcagacg
cttctcggcgcgaccggcaccggcaagacgtttacgatcgctcacgtcatcgccgaagtg
caaaagccgacgctcgtcatcgcccacaacaagacgcttgccgggcagctggcgaacgag
tttcgcgccttttttccccacaacgccgtcgaatatttcgtgagctactacgattactat
cagccggaggcgtacgtgccggagacggacacctacatcgaaaaagacgccagcatcaac
gacgaaatcgacaagctccgccactcggcgacgagcgccctcttcgagcggcaggacgtc
atcatcgtcgcttcggtgtcggcgatctacggcctcggcgacccggcggaataccgggac
ctcgtcctttcgcttcgggtcgggatggaaaagccccgggacgaggtgctccggaagctc
gtcgacatccagtacacccggaacgactacgacttccaccgggggacgtttcgcgtccgg
ggcgacgtcgtcgagatcttccccgcctcccgaagcgagcaggcgatccgggtggagttt
ttcggcgacgagatcgagcggatcgccgagatcgacgttctcaccggcgagatcaccggc
tttcgggagcacgtcgccattttcccggcgtcccactacgtcacccgtcgggagacgctc
gagcgggcgatccggagcatcgagggggagctcgaggagcggctcggggaactccgggcg
gccgggaagctcctcgaagcccagcggctcgagcagcggacccgctacgacatcgagatg
ctccgggagctcggctactgcccggggatcgaaaactattcccggcatcttaccggacgg
gcgccgggggagccgccgtatacgctgctcgattatttccctgacgattttcttctcgtc
atcgacgagtctcacgtgacgatcccgcagcttcggggaatgtacaacggggacatgtcc
cggaagctgaccctcatcgagcacggcttccggctgccgtcggcggcggacaaccggccg
ctcaagtttgaagaattcgaggcgcggatccgccaggcgatcttcgtctcggcgacgccg
gggccgtacgagctggaaaaggcgccggacgtcgtcgagcagatcatccgcccgaccggc
ctcgtcgatccggaagtcgtcgtccggccgacggccggtcagatcgatgacctcgtcgag
gagatccgcctccgcatcgagcgggacgagcgcgtgctcgtgacgaccctcaccaagcgg
atggcggaggacctcaccgactacctgaaggagctcggcatcaaggtccgctacatgcac
tccgacatccagacgatcgagcggctcgccctcatccgggacctccgcctcggcgtcttc
cacgtcctcgtcggcatcaacctcctccgggaagggctcgatatcccggaggtgagcctc
gtggcgatcctcgacgccgacaaggaaggcttcctccggagcgagacgtccctcatccag
acgatcggccgggcggcccggaacgcgaacgggaaggtcatcctctatgccgaccggatc
acggaggcgatgcgccgggcgatcgacgaaacggagcggcggcgccggatccagctcgcc
tacaacgaagcccacggcatcacgccggagacggtccggaaaaaggtgcatgacgtcatc
gaagcgacccgggcgaaggagccgaagacggactacatcgccgagatccgccgggcgaaa
accgccgaagcccgggagaagctcatcgcgcgcctcgagcgggagatgaaggaggcggcg
gacgccctcctcttcgaacgggcggccgagctccgggacctcatcatcgagctcaagggg
gagggtgcatggcgcaagacaaaatcgtcgtcaaaggggcacgcgtccacaatctaa
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