Hymenobacter jejuensis: FHG12_04925
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Entry
FHG12_04925 CDS
T06049
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hyj
Hymenobacter jejuensis
Pathway
hyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHG12_04925 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyj03019
]
FHG12_04925 (rny)
Messenger RNA biogenesis [BR:
hyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FHG12_04925 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4954
YtxH
NttC
KH_2
Motif
Other DBs
NCBI-ProteinID:
QDA59489
UniProt:
A0A5B7ZXF9
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All DBs
Position
complement(1247250..1248914)
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AA seq
554 aa
AA seq
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MSDTIYIVLAAVLALVVGIVVGRLLAGKARQDHEAEARSRAQQVLQEAEEKANRIRDERI
QQSKDKFRGLKNEFEQESRRQKQALDQELTERRAAVVEQEQSIKQLTQTTQRQLEQLQRK
EQELETTREKLQNESQQQREKFEAQEEKRRLTHETQIAKLQQKEADLDEKRHAIQQQLEV
ISGLTAAEAREQLVESLKNEAQIQASSYIKDVVAQAKLSATKDAKKVVLETIQRTAAEHA
IENCVSIFNIESDDVKGKIIGREGRNIRALEAATGVEIIVDDTPEAIIISGFDPVRREVA
RLSLHLLVKDGRIHPARIEEIVAKTRKNIDEEIVEIGERTIIDLGIHGLHPELIKMVGRM
RFRSSYGQNLLQHSREVANLCATMAAELGLNVKHAKRAGLLHDIGKVSTEEPELPHAILG
MEMAKKYKEHPDVVNAIGAHHDEIEMTAMISPLVQACDAISGSRPGARREMMESYIKRLK
QLEETAVSFDGVLQCYAIQAGRELRVMVNAENVTDERAQELSYEISQKIEKEMQYPGQIK
ITVIREMRAVAYAK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacactatttatatcgtcctggccgctgtgcttgcccttgtggtcggcattgtg
gtggggcgcctgctggccggaaaggctaggcaggatcacgaagccgaagctcgctcccgc
gcgcagcaagtgctgcaggaagccgaagaaaaggccaaccgcatccgcgacgagcggatt
cagcagtcgaaagacaagttccgcggtctcaaaaacgaatttgagcaggaaagccgccgc
caaaagcaggccctcgatcaggaactcaccgagcgccgtgctgccgtggtagagcaggag
cagagcatcaagcaactgacccagactacccaacgccaactcgagcagctgcaacgcaaa
gagcaggaactggaaacgacccgcgaaaagctgcaaaatgagtcgcagcagcaacgcgaa
aaattcgaagcccaggaagaaaaacgccgtctgacgcacgaaactcaaatcgctaagctt
cagcaaaaagaagctgacttggacgagaaacgccacgcgattcagcaacagctcgaagtc
atctcgggcctgacggctgccgaagcccgcgagcaattggtagaatcgttgaaaaacgaa
gcccagattcaggccagcagttacatcaaggatgtagtagcacaggccaagctgtcggct
acgaaagacgccaaaaaggtagtgctggaaaccattcagcgcaccgccgccgaacacgcc
atcgaaaactgcgtgtcgatcttcaacatcgaatccgacgatgtgaagggcaaaatcatc
ggtcgggaaggccgtaacattcgggcgctggaagccgcaaccggcgtcgagattattgtc
gacgacacgcctgaggccatcatcatctccggcttcgaccccgtgcgccgtgaggtagcg
cgcctgtcgttgcacttgctggtgaaagacggacgcattcacccggctcgcattgaagaa
atcgtggccaaaacgcgcaagaatatcgacgaggaaattgtcgaaatcggcgagcgcacc
atcatcgatctgggcattcacggcctgcatccggagctgatcaagatggtgggccggatg
cgtttccgctcgtcgtatggccaaaacttgctgcaacactcgcgcgaagtcgccaacctc
tgcgccacgatggccgctgagctgggcctgaacgtgaagcatgccaaacgtgctggcttg
ctacatgatatcggcaaagtaagcaccgaagagcctgagcttccccacgccattttgggc
atggagatggccaagaaatacaaagagcatcccgacgtagtgaatgccattggcgctcac
cacgacgaaatcgagatgacggccatgatttcgccgctggttcaggcctgcgacgccatt
tccggctcgcgtcccggcgcccgccgtgagatgatggaaagctacatcaaacgcctcaag
cagctcgaagaaacagccgtgtcgtttgacggggtgctgcaatgctacgccattcaggct
ggccgtgagctacgcgtaatggtgaacgccgaaaacgtaaccgacgagcgcgcccaggaa
ttgagctacgagatctcgcagaaaatcgagaaggaaatgcagtatcctggccagatcaag
attaccgtgatccgggaaatgcgcgcagtggcttacgccaagtaa
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