Hymenobacter jejuensis: FHG12_15855
Help
Entry
FHG12_15855 CDS
T06049
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hyj
Hymenobacter jejuensis
Pathway
hyj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FHG12_15855 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyj03400
]
FHG12_15855 (uvrA)
DNA repair and recombination proteins [BR:
hyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FHG12_15855 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FHG12_15855 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
SMC_N
DnaJ_CXXCXGXG
AAA_29
AAA_33
AAA_16
RsgA_GTPase
AAA_25
AAA_15
DUF4350
YmcF-like
NACHT
SLFN-g3_helicase
MeaB
Motif
Other DBs
NCBI-ProteinID:
QDA61481
UniProt:
A0A5B8A265
LinkDB
All DBs
Position
3817962..3820514
Genome browser
AA seq
850 aa
AA seq
DB search
MANNSVSQNQNSDSQLHTGFVRVRGAREHNLKNVDLDIPRDALVVFTGVSGSGKSSLAFG
TLYAEAQRRYLESVSPYARRLFHQMAVPEVDAIDGLPPAVALQQQRGTPTTRSSVGSVTT
LSNLLRMLYSRAGDYPANQSIVYAEGFSPNTPEGACPTCHGLGRIYEVTEESMVPDPSLT
IRERAIAAWPQAWGGQNQRDILVTLGYDVDTPWRDLPQKDRDWILFTDEQPVVPVYPGYS
PAETQRALRRKEPPNYMGTFTGVKRHVLHTFANTQSPLMKKRALQYMISTACPLCHGKRL
RPESLSVTFAGLDIADMSGLPLKRVSQLLRPFADGTATGRKKHDAAHPEQVIVSQRIAAD
LVARLAVLLDLGLGYLSLERSTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPS
DTEALLKALASLKKAGNSLFVVEHNLDVIRQADWLVDVGPAAGEQGGEILYSGPPAGLDE
ISGSQTRRYLFVSDNKKELRTSRPPAGWLRLAGVTRNNLQQLEVKFPLGVLTTVTGVSGS
GKSSLVSQVLVELVAEQLGQEVLLEEEEGADPLERAAPIETGGRIVGGMEHLKRLVRVDQ
KPIGRTPRSNMATYTGLFDHVRKLFAATKMAKARRYDAGRFSFNVAKGRCENCQGEGFVM
VELLFLPSVYAPCPVCHGSRYNAKTLEVTYKDKNIAEVLALTVDAAWEFFADEPTVLRAL
TVLREVGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGNSLYVLDEPTTGLHPSDVEK
LMTQLEGLVEAGNTVIVVEHDMRVVAGSDWVIDMGPGAGDEGGQVVAAGPPAEVANVRES
RTAPYLARFR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggccaataactctgtttcgcaaaatcaaaatagcgatagtcagctgcatacgggtttt
gtgcgcgtgcgcggagcacgggagcacaatctaaaaaatgtcgatctcgacattccgcgc
gatgcgttagtggtgtttacgggcgtatcgggctcgggaaaatcgtccttggcttttggc
accctctacgccgaggcccaacgccgctacctcgaatcggtgtcgccgtatgcgcggcgg
ctgtttcaccagatggctgtgcccgaagtcgacgccatcgacggcttgccgccggccgtg
gccctgcaacagcagcgcggcacgcccaccacacgctcgtcggtgggcagcgtcacgacg
ctctcgaacctgttgcgcatgctgtattcgcgggccggcgattatcctgctaatcaaagc
attgtatatgccgagggattttcgcccaacacgcccgagggtgcctgccccacgtgccac
ggcttgggccgtatttatgaagtaacggaagaatcgatggtgcccgacccgtcgctgacc
attcgggagcgggcaattgcggcatggccccaagcctggggcggccaaaaccagcgcgac
atcttggttacgctgggctacgacgtagataccccctggcgcgaccttccccaaaaagac
cgcgactggattctgtttaccgacgagcaaccggtggtgcctgtgtaccccggctactcg
cccgccgaaacgcagcgcgcgctccggcgcaaggagccgccaaactacatgggcacgttt
acgggtgttaagcggcacgtgctgcacaccttcgccaacacccaaagcccgctgatgaaa
aagcgggcgttgcagtacatgatcagcacggcctgcccactttgccacggcaagcgcctg
cggcccgagtcgctgtcggtgacctttgccggcctggacatcgccgatatgtcggggctg
cctttgaagcgtgtgagccagttgctgcgcccttttgccgacggcactgccaccggccgc
aaaaagcacgatgctgcgcaccctgagcaagtaattgtgagtcagcgcattgcagccgac
ttggtagcacgccttgccgtgctgctcgatctgggcttgggctacctgtcgttggagcgc
agcacgcccacgttgtcgccgggcgaattgcagcgcctgcgtctggctacgcagctgtat
tccaacctgttcggggtggtgtacgtgctcgacgaaccctcggcgggcctgcacccctcc
gacaccgaagccttgctgaaagccttggccagtctgaagaaagctggcaattcgctgttt
gtcgtcgagcacaacctcgacgtgatccggcaggccgattggctggtagacgttgggccc
gcggccggcgagcagggtggcgaaatactctacagcggcccgcccgccgggcttgatgag
ataagcggttcacaaacaaggcgttacctttttgtatcggacaacaaaaaagagcttcgc
acctcgcgcccgcccgctggctggttgcggctggctggcgttacgcgcaacaatttgcag
caactcgaggtgaagtttccgttgggcgtgctcaccacggttacgggcgtatcgggctcg
ggcaaatcgagcttggtaagccaggtactggtagaactggtagccgagcagctagggcag
gaggtgctgctcgaagaagaggaaggcgccgacccgctggagcgtgctgccccgatcgag
accggcgggcgcattgtcggcggcatggagcacctcaaacggctggtgcgcgtcgatcag
aagcccattggtcgcacgccgcgttccaatatggccacctatacagggttgtttgaccat
gtgcgcaagctgtttgctgctaccaaaatggccaaagcccgccgctacgacgcgggccgg
ttttccttcaacgttgccaaaggccgctgcgaaaactgccagggcgagggctttgtgatg
gtcgaattgctctttttgcccagcgtgtacgcgccctgccccgtctgccacggctcgcgc
tacaatgccaaaaccctggaagtcacctacaaagacaaaaacatcgccgaagtactagcc
ctgactgtggacgcggcctgggagtttttcgccgacgagccgacggtgctgcgggccctt
acggtgctgcgcgaagtgggcctgggctacctgcgcctcggccagccggccaccgagctg
tcgggtggcgaggcccagcgcattaagctggcgacggagctgcaacgggcccagcgcggc
aactcgctctatgtgctcgacgagcccaccaccggcctgcacccctccgacgtggaaaag
ctgatgacccaactcgagggcctggtcgaagccgggaacacggtcattgtggtggagcac
gacatgcgcgtggtggccggcagcgactgggtaatcgacatgggccccggcgcgggcgac
gaaggtgggcaggtggtggccgctggtccgccggcggaagtcgccaacgtcagggaaagc
cgcaccgcgccgtatttggctaggtttcggtaa
DBGET
integrated database retrieval system
