Hymenobacter jejuensis: FHG12_17400
Help
Entry
FHG12_17400 CDS
T06049
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hyj
Hymenobacter jejuensis
Pathway
hyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHG12_17400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyj03019
]
FHG12_17400
03009 Ribosome biogenesis [BR:
hyj03009
]
FHG12_17400
Enzymes [BR:
hyj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FHG12_17400
Messenger RNA biogenesis [BR:
hyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FHG12_17400
Ribosome biogenesis [BR:
hyj03009
]
Prokaryotic type
rRNA helicases
FHG12_17400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QDA61761
UniProt:
A0A5B8A2Y1
LinkDB
All DBs
Position
4241149..4243104
Genome browser
AA seq
651 aa
AA seq
DB search
MEKVKFDELALSAEMQRAITEVGYEEASPIQSAAIPVLLEGKDVIGQAQTGTGKTAAFSI
PAIERVDSDSRDVQVLVLCPTRELAVQVSGEIQKLGKYKRGLAVVPIYGGSSYDRQFRAL
ERGVQIVIGTPGRVMDHIERGTLKLDKVKTVILDEADEMLDMGFRDDIETVLSKMPAERQ
TVFFSATMSKPIMELTKKYQRDPQIVKVNHQEMTVSNIEQSYYEVRGPQKKDVLTRLIDM
FNLKSAIVFANTKRMVDDIVGDLQAKGYFAEGLHGDMGQQQRQNTLDKFRKGTLEILVAT
DVAARGIDVENVEAVVNYDLPADEEYYVHRIGRTGRAGKSGRAFTFVSGRDIYKLRDIMR
FTKAQIKQERIPSFEDVSEVKTTLFLNQIKEIIEKGNLEKYVARVQRLLDQEEETTSLDI
AAALLKMTMKEGKQAEKSLEADRERGAVRPGFTRLFVTMGKKDRVHPRDIVDLIAENTGL
TAGKVGDIALYDKFSFVEVPSEFADEIISALGRTSIQGRPVSFNIATPRQEGDAQEEGGN
RERRSFGADENRPARRAPFGDRREGGSGGYGGNRGGGSSYGGNRGGGSYGDRREGGSSYG
GSRGGSSFGGNRGGGSSYGGNRGGGSYGGNSRGGSSEGGYKGRRDNQSFDE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtaaaatttgacgagctcgctctctctgcggagatgcagcgcgctatcacg
gaagtaggctacgaagaggcttcgccaatccaaagtgctgctatccccgttttgctggaa
ggcaaagacgtaattggtcaggcccaaacgggtaccggcaaaaccgcagcttttagtatc
cccgccattgagcgcgtcgattccgactcgcgcgacgtgcaagtattggtgctgtgccct
acccgtgagcttgctgtgcaggtgtcgggtgaaattcagaaactcggcaagtacaagcgt
ggtctggccgtagtgccgatctacggtggctcgagctacgatcgtcagttccgtgctctg
gagcgcggcgtgcaaatcgtaatcggtacgcccggccgtgtgatggaccacatcgaacgc
ggtacgctaaagcttgacaaggtgaaaaccgtcatcctcgacgaagccgacgaaatgctc
gacatgggcttccgcgacgacatcgaaacggtgctctcgaagatgccggccgaacgccag
acggtgttcttctcggccacgatgagcaagccgatcatggaactgacgaagaagtaccag
cgcgatccgcaaatcgtgaaggtcaatcatcaggaaatgaccgtctcgaacatcgagcag
agttactacgaagtgcgcggtccgcagaaaaaggacgtgctcacccgtctgatcgacatg
ttcaacctgaagtcagccattgtgtttgctaacaccaagcgcatggtagacgacatcgta
ggcgacctgcaagccaaaggctattttgccgaaggactgcacggcgacatgggccagcag
cagcgccagaacacgctggataagttccgcaaaggcacgctggaaattctggtagccacc
gacgtagccgcccgtggtatcgacgtagaaaatgtagaagctgtagtaaactacgacctt
cccgccgacgaagaatattacgtgcaccgcattggtcgtacgggccgcgccggcaaatcg
ggtcgcgccttcacattcgtgtcgggtcgcgatatttacaagctgcgcgacatcatgcgc
tttaccaaagcgcagatcaagcaggaacgcattccgtcgtttgaggacgtatcggaggtg
aaaaccacgctgttcctgaaccagatcaaagaaatcatcgagaaaggcaacttagaaaag
tacgttgcccgtgtgcagcgtctgctcgaccaggaagaagaaactacctcgttggacatt
gcagctgcgttgctgaaaatgaccatgaaggaaggcaaacaggctgaaaaaagcctggaa
gccgaccgcgagcgtggcgccgttcgtccgggtttcacgcgtttgttcgtgacaatgggc
aaaaaagaccgtgtgcatccacgtgatatcgtggatctgattgccgaaaacaccggcctc
accgctggtaaagttggcgatatcgcgctctacgataagtttagctttgtagaagtgcct
tccgagtttgccgatgagatcatctcggcgctgggccgcacctccatccaaggccgtccg
gtttccttcaacatcgccactcctcgtcaagaaggagatgcacaggaggaaggcggcaac
cgcgaacgtcgcagcttcggcgccgatgaaaaccgtccggctcgtcgcgctccctttggc
gatcgtcgcgagggtggcagtggtggctacggtggcaaccgcggtggtggcagcagctac
ggcggcaaccgcggcggcggaagctacggcgaccgtcgcgaaggcggcagcagctacggc
ggaagccgcggtggcagcagctttggtggcaaccgcggtggcggtagcagctacggcggc
aaccgcggcggcggaagctacggtggcaatagccgcggtggcagcagcgaaggtggctat
aaaggccgtcgcgacaaccaaagctttgacgaatag
DBGET
integrated database retrieval system
