Hymenobacter jejuensis: FHG12_18850
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Entry
FHG12_18850 CDS
T06049
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hyj
Hymenobacter jejuensis
Pathway
hyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHG12_18850 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyj03019
]
FHG12_18850 (pnp)
03016 Transfer RNA biogenesis [BR:
hyj03016
]
FHG12_18850 (pnp)
Enzymes [BR:
hyj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FHG12_18850 (pnp)
Messenger RNA biogenesis [BR:
hyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FHG12_18850 (pnp)
Transfer RNA biogenesis [BR:
hyj03016
]
Prokaryotic type
tRNA degradation factors
FHG12_18850 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
RNase_PH_C
PNPase
KH-I_KHDC4-BBP
S1_RRP5
KH_2
Cas_CT1975
Dppa2_A
Motif
Other DBs
NCBI-ProteinID:
QDA62034
UniProt:
A0A5B8A3M1
LinkDB
All DBs
Position
complement(4584892..4587051)
Genome browser
AA seq
719 aa
AA seq
DB search
MPNYNAVTKSITLPDGRQITIETGKLAKFADGAVVVRLGDAMLLATVVSQPSARGEVDFL
PLSVDYQEKFGGAGNIPGSFQRREGRLSDYEILVSRLVDRILRPMFPKDYHYEVQVMITL
ISADKAVQPDALAALAASAALSVSDIPFAGPISEVRVARIDGKLQINPLTVDIARADIDL
IVGATADSVAMVEGEMNEVSEEEMVEAIAYAHEAIKEQVRAQQELAAAVEKSHVKREYPK
YEENEELKKRVLDEVYQQAYEIAKSGNTSKSGRKDAFGAVKKSLTEKLLEEQPELDMKMF
GRYYASAEKKAIRDMMIKERTRLDGRALTQIRPIWSEVNYLPGAHGSALFTRGETQSLTT
VALGTKLDEQIIDTAMQSGYNKFMLHYNFPAFSTGEVKPNRGPGRREIGHGNLAMRSLKK
VLPSEDENPYTIRVVSDILESNGSSSMATVCAGSLALMDAGIKVRAAVSGIAMGLVQDKE
TGDYAVLSDILGDEDHLGDMDFKVTGTEKGIVACQMDIKIQGLSNEIMTAALHQAREGRL
HILGEMAKTISAPAAELKPHTPRSHKMLIDKEFIGAVIGPGGKVIQQIQKDTNATVIIEE
KDEKGHVSIFASNQEDMEAAISRIRAIAAQPEVGETYKGKVRSIQPYGAFVEIMPGKDGL
LHISEVAHERLATLEGVLEVGQDIDVKLLDIDKKTGKYRLSRKALLPKPEKAQANGEAQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcccaattacaacgctgttaccaaatccattacgctgcccgatggccggcaaatcaca
atcgaaaccggcaagctggccaaattcgccgacggcgccgtagtcgtacgccttggcgat
gccatgctgctggctacggtcgtgtcgcagcccagcgctcgcggtgaggttgacttcctg
ccgctgtcagtcgattatcaggagaaatttggaggtgccggtaatattcccggttcgttt
cagcgccgcgaaggccgcctgtcggactacgaaatcttggtttctcgtcttgtagaccgc
attttgcggccgatgttccctaaggattatcactacgaagtacaagtgatgatcacgctg
atctcggccgacaaagccgttcagcccgatgcgttggcagccctagctgcttcggctgcc
ctttcggtttcggacattccttttgccggcccgatttcggaggtacgcgtagcccgtatc
gacggcaagctgcaaattaaccccctgaccgttgacattgcccgcgccgacatcgacctg
atcgtaggtgctactgccgattcggtggctatggtggaaggcgagatgaacgaagtgagc
gaagaggaaatggtggaagccattgcctacgctcatgaagccattaaagagcaagtacgc
gcacagcaagaactggccgctgccgtggagaaatcgcacgtaaagcgtgagtatccgaag
tacgaagaaaacgaagagctgaaaaagcgcgttctcgacgaggtgtatcagcaggcatac
gagattgccaaatctggcaacaccagcaagtcaggtcgtaaggatgctttcggcgctgtg
aagaagtcactgaccgagaagctgttggaagagcagcctgagctggacatgaaaatgttc
ggtcgctactacgcttccgctgaaaagaaggccatccgcgacatgatgatcaaagagcgc
acgcgcctcgacggccgcgcgctgacgcagatccgtccgatttggagtgaagtgaactac
ttgcccggagctcatggctcggctttgtttacccgcggcgaaacccaatcgctgactacc
gtagcgctgggtaccaaactcgatgagcaaatcatcgatacggccatgcaatcggggtat
aacaagttcatgctgcactacaacttccctgccttctcgaccggtgaagtgaagcccaac
cgcggccccggccgccgggaaattggtcacggcaacttggccatgcgttcgctgaagaaa
gtattgccttcggaagatgaaaacccttacaccattcgcgtggtttcggacattctggaa
tcgaatggctcgtcgtcgatggcgacggtatgcgcgggttcgctggcgctgatggacgcg
ggcatcaaagtgcgtgcggccgtttcgggtattgccatgggccttgtacaggacaaagaa
accggcgattatgctgtgctttcagacattctgggcgatgaggatcacctcggtgatatg
gacttcaaagtaaccggcacggagaaaggcatcgtggcttgccagatggacatcaaaatc
cagggcttgagcaatgaaatcatgacagccgcgctgcaccaggcccgtgaaggccggttg
cacattttgggtgaaatggccaagaccatctcggcgcccgctgccgagctgaagccgcat
acgcctcgttcgcataagatgttgattgacaaagagtttatcggtgcggtaatcggaccg
ggtggcaaagtcattcagcagattcagaaggataccaacgctacggttatcatcgaggag
aaggacgagaaaggccacgtaagcattttcgcttccaaccaagaagatatggaagcggcc
atcagccgcatccgtgccatcgcggcccagcccgaagtaggcgaaacctacaaaggcaaa
gtgcgcagcatccagccctacggcgctttcgtagaaatcatgccgggcaaagacggcctg
ctgcacatttcggaagtagctcacgaacgcctcgccaccttggaaggtgtgctcgaagta
ggccaggatatcgatgtgaagctgctcgacattgacaagaagacgggcaagtaccgtctc
tcgcgcaaggcgctgcttccgaagcctgaaaaggctcaggccaacggcgaagcccagtag
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