Hymenobacter jejuensis: FHG12_18955
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Entry
FHG12_18955 CDS
T06049
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyj
Hymenobacter jejuensis
Pathway
hyj03030
DNA replication
hyj03430
Mismatch repair
hyj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FHG12_18955
03430 Mismatch repair
FHG12_18955
03440 Homologous recombination
FHG12_18955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyj03032
]
FHG12_18955
03400 DNA repair and recombination proteins [BR:
hyj03400
]
FHG12_18955
Enzymes [BR:
hyj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FHG12_18955
DNA replication proteins [BR:
hyj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FHG12_18955
DNA repair and recombination proteins [BR:
hyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FHG12_18955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
DUF7508
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QDA62052
UniProt:
A0A5B8A6Q0
LinkDB
All DBs
Position
4609230..4610714
Genome browser
AA seq
494 aa
AA seq
DB search
MYAIIDLETTGGQPTQDRITEIAIFIHDGEQVIDQYETLLNPGRPIPFFISQLTGINDDM
VRDAPKFHEVARKIVEMTEGCVFVAHNVRFDYSFMKKEFADLGYNYSRKTLCTVRLSRSL
IPGQPSYSLGKLCQNIGIPLNNRHRAAGDAEATAILFDRLLKITQQSESLTQPGISPADT
LAAVDAVAPSGRQPKAAKQPSPKRVTAVQEAIKTALLPPNITPEKVASLPQEAGVYYFYN
EEGEVIYVGKSINIYKRIQQHFAVDYKSRKSLEFKNSISDITWHLTGSELVALLYESDEI
KRLKPLYNRAQRRSVFPAGIFLRTDENGYLRLYYGRADDHAESHPLIALGNQFKAKGFLF
HKVSKFGLCQKLCDLYKTQGSCFDYQVHRCKGACVGLEPPEEYNKRVEEAIESFTFEHGS
FVVIGKGRREDEKSIVLVENGRYLGFGYVDGEFSARRIGDFKDAITRYNDNKDVQQIIRQ
YLRTPHKDKVKIFR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgctatcatcgaccttgagaccaccggtgggcagccaacccaggaccgcatcacc
gagattgccatttttattcacgacggcgaacaggtcatcgaccagtacgaaaccctcctg
aatccggggcggcctattcctttctttatcagccagttgaccggcatcaacgacgacatg
gtgcgcgatgcgcccaagtttcatgaggtggcccgcaagattgtcgagatgaccgaaggc
tgcgtgtttgtggcccacaacgtgcggtttgattactccttcatgaagaaggaatttgcc
gatttaggctacaattactcgcgcaaaaccctgtgtaccgtgcgcctgagccgctccctg
attccgggtcagccgagctacagcctaggcaagttgtgccagaatattggcattccgctg
aacaaccggcaccgcgccgccggcgacgccgaagccaccgccatcctgtttgatcgtctg
ctcaaaatcacgcagcaaagcgaatccctgacccagcccggcatcagcccagctgatacg
ctggccgccgtcgacgcggtggcacccagtggccgccagcccaaagccgccaagcagccc
agccccaagcgcgttacggccgtgcaggaagccatcaagacggctttgctcccgcccaac
atcacacccgaaaaagtagcttcgctgccccaggaagccggcgtgtattacttctacaac
gaggaaggcgaagtgatttatgtgggcaaaagcatcaacatctacaaacgcattcagcag
cacttcgccgttgattataagtcgcgcaagtcgctggaattcaaaaactcgatttcggac
attacctggcatctaactggctctgagttggttgcgttgttgtacgaatccgacgaaatc
aagcgcctcaagccactctacaaccgcgctcagcgccgctcggtgtttccggcgggcatt
tttctgcgcaccgacgaaaacggctacctgcgcctttactacggtcgggccgacgaccac
gccgagtcacatccgttgattgcgctgggcaaccagttcaaagccaagggattcctgttt
cataaagtatcgaagttcgggctatgccagaagctctgcgatctgtacaaaacccagggc
tcctgctttgattatcaggtacatcgctgcaaaggcgcctgcgtgggcctggagccgccc
gaagaatacaacaagcgcgtagaagaagccatcgagtcgtttacgtttgagcacggctcg
tttgtggtcatcggcaaaggacgtcgcgaagacgaaaaatccattgtgctggtcgaaaac
ggccggtacttggggtttggttacgtcgacggcgagttttcggcgcggcgaatcggtgat
tttaaagatgcgatcacgcgctacaacgacaacaaagacgtccaacagatcatccgtcag
tacctgcgcacaccgcacaaagacaaagtgaaaatctttcggtga
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