Hymenobacter jejuensis: FHG12_20410
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Entry
FHG12_20410 CDS
T06049
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hyj
Hymenobacter jejuensis
Pathway
hyj03420
Nucleotide excision repair
hyj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FHG12_20410
03430 Mismatch repair
FHG12_20410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyj03400
]
FHG12_20410
Enzymes [BR:
hyj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FHG12_20410
DNA repair and recombination proteins [BR:
hyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FHG12_20410
MMR (mismatch excision repair)
Other MMR factors
FHG12_20410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_22
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDA62669
UniProt:
A0A5B8A5Z4
LinkDB
All DBs
Position
4940827..4943070
Genome browser
AA seq
747 aa
AA seq
DB search
MDYLKLLNESQAAAVMQTEGPCMIIAGAGSGKTRVLTYRIANLLEQGVDPFNILALTFTN
KAAREMRARIEKVVGPEAKNLWMGTFHSIFARILRSEADKIGFPRHFTIYDTQDSKTLVS
QIVKELDLDDKLYKPGMVLGRISAAKNKLISVQQYVNDPVIRQDDEAALRPKIGVIYQQY
ASRCFKAGAMDFDDLLFNTNVLFKDHPDVLNKYQNIFKFVMVDEYQDTNYSQYLITRKLA
AKDRNICVVGDDAQSIYAFRGADIQNILNFEKDYPELQVFKLEQNYRSTKNIVRAANSVI
KNNKAQLRKDVFSDNEDGTLIEVIKASSDNEEGKLVANSIYEDKMNLHLSYDDFAILYRT
NAQSRAMEEALRKLNIKYKIVGGLSFYQRKEIKDLVAYLRLTVNPNDEQALRRVINYPKR
GIGDTTISKLINAAEESNHTLWEVVSNANSFLATRIANPIEGFAEQIKSYAVLAAKEDAF
EAAKFIAKNSGMIEELYSDKSIEGLSRYENIQELLNGIKEYVDDPEREDKSLAAFLQDIA
LVTDADTKDAKDEGETVTLMTIHSAKGLEFRNVYIVGMEENLFPSQMMITSRADLEEERR
LFYVAITRAEKKLVLSYATSRYQWGNLRSCEKSRFLDEIDPQYVDFKFAASPNPGESTFG
HVLERRSNLIPPAPRKTVAKGYTPPADFQPSDTSNLATGQRVEHPKFGYGTVTKLETQQG
STKAIIQFEEVGEKTLLLSFAKLRVLT
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
ctggattatcttaaactactgaatgagtcgcaggcggcggcggtaatgcaaaccgaaggc
ccctgcatgattatagcgggcgccggttcgggcaaaacgcgggtattgacctaccgcata
gccaacttgctcgaacagggcgtggacccgttcaacattctggctctgactttcaccaac
aaagccgcgcgggagatgcgggcgcggattgaaaaggtggttgggccggaagccaagaac
ctgtggatgggcacattccactcaatttttgcgcgcatcctgcgctctgaagccgacaaa
attggtttcccgcgccactttaccatttacgacacgcaggactccaaaaccttagtgtcg
cagattgtgaaggagttggacttggatgacaagctttacaagccgggcatggtgctgggt
cgcatttcagcggccaagaacaagctaatttcggtgcaacagtatgtaaatgaccccgtt
atccggcaggacgacgaagcagctttacgccctaaaatcggggtgatttaccagcaatat
gcctcgcgctgcttcaaggctggcgccatggactttgatgatttgttgttcaacaccaac
gtgctgttcaaggatcatccggatgtgctgaataaataccagaacatcttcaagtttgtg
atggtcgatgagtatcaggacacgaactattcgcagtacctgattaccagaaagttagcc
gccaaggaccgcaacatctgcgtggtgggcgacgatgcccaaagcatctacgccttccgc
ggcgccgacattcagaacatcctcaacttcgagaaggattatcctgagctacaggtcttt
aagctggagcaaaactaccgttcgaccaagaacatcgtgcgggcggccaactccgtcatc
aagaacaacaaagcccagctccgcaaagacgttttttccgacaacgaagacggcacccta
atcgaagtaatcaaggcttcctccgacaacgaggaaggtaaattggtggctaactcgatc
tacgaggacaagatgaacctgcatctttcctacgacgactttgccatcttgtaccgaacc
aacgcccaaagccgggcaatggaagaggccctgcgcaagctcaacatcaagtacaagatc
gttggcggcctctctttctatcagcgcaaggaaattaaggatcttgttgcttacctgcga
cttacggtaaacccaaatgacgagcaggcgttacgacgcgtgatcaattaccctaagcgt
ggcattggcgacacgaccatcagcaagctgattaatgccgctgaggaatcgaaccacacg
ctgtgggaagtggtcagcaacgccaattctttcctcgcgacgcgcattgcaaatcctatt
gaagggtttgccgagcaaatcaagagctatgccgtgttggcggccaaagaagatgcgttt
gaggcagccaagttcattgccaagaattcggggatgatcgaggagctttactcggataag
agcattgaaggcttgtcgcgctacgaaaacattcaggaactactgaacggtatcaaggag
tacgtagatgatccggagcgtgaagacaagtcgctggcagcctttctgcaagacattgcc
ctcgtaaccgacgccgacaccaaagacgccaaggacgaaggcgaaacagtcacgctgatg
accattcactcggctaaaggtctggaattcagaaatgtatacatcgtcggcatggaggaa
aatctcttcccctcgcagatgatgattacgtcgcgcgctgatttggaggaagagcgccgc
ctcttttacgtggccattacgcgggccgagaagaagctggtgcttagctacgctacctcg
cgttatcagtggggtaacctacgcagctgcgaaaagagccgctttttagatgagattgat
cctcaatacgttgactttaagtttgcagcaagcccaaaccccggcgagtcaactttcggg
cacgtattggagcggcgcagcaaccttattccgcctgctccgcgtaagacggtagcaaaa
ggctataccccgcccgcggattttcagccgagcgatacctccaatctcgctactgggcaa
cgggtggagcaccctaagtttggctacggcaccgttaccaagctggaaacgcaacaaggc
tcgaccaaagccatcattcagtttgaagaagtcggcgagaaaaccttattgctgagtttt
gccaaattgcgcgtgctcacttaa
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