Hymenobacter yonginensis: O9Z63_05370
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Entry
O9Z63_05370 CDS
T08743
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hyk
Hymenobacter yonginensis
Pathway
hyk02024
Quorum sensing
hyk03060
Protein export
hyk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
O9Z63_05370 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
O9Z63_05370 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O9Z63_05370 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hyk02044
]
O9Z63_05370 (ffh)
Enzymes [BR:
hyk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
O9Z63_05370 (ffh)
Secretion system [BR:
hyk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
O9Z63_05370 (ffh)
Eukaryotic Sec-SRP protein
O9Z63_05370 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
AAA_16
nSTAND3
AAA_17
cobW
CLP1_P
ParA
ATPase
APS_kinase
KAP_NTPase
KTI12
AAA_30
NTPase_1
AAA_31
DO-GTPase1
ATP_bind_1
AAA_33
AAA_14
AAA
Helicase_RecD
AAA_18
ArsA_ATPase
NPHP3_N
ResIII
PIF1
AAA_5
SLFN-g3_helicase
NACHT
AAA_24
MMR_HSR1
Pox_A32
TsaE
YqeC
Thymidylate_kin
MobB
AAA_28
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WBO85676
UniProt:
A0ABY7PS43
LinkDB
All DBs
Position
1245822..1247171
Genome browser
AA seq
449 aa
AA seq
DB search
MFDNLSTKLDKAFKTLKGQGSITEINVAATVKEIRRALVDADVNYKVAKEVTDKIKDEAM
GRDVLISVSPGQLMTKIVYDELTQLMGGEKQDIVIKGEPAVVLLSGLQGSGKTTFAGKLA
AYLKKQNRTVLLVACDVYRPAAIDQLKVLGTQVDVEVYSEPENKNPVEISRNAIEYARKN
NKKVVIIDTAGRLAVDEQMMSEIEAVKRAINPSETLFVVDSMTGQDAVNTAKTFNDRLNF
DGVVLTKLDGDSRGGAALSIRAVVEKPIKFISTGEKMEALDMFYPDRMAQRILGMGDVIS
LVERAQQQFDEDEAKRINQKIRKNQFNFDDFLSQLEQIKKMGNLKDLVGMIPGMSKAIKD
VDIDDDAFKPIEAIIQSMTPMERAQPELLNGSRRRRLAKGSGTDIQQVNNLMKQFEDMRK
MMRTMNKMSQTKGGMQQMARMMGMKGPLR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataacctcagtaccaagctcgataaagcctttaaaaccctcaagggccagggc
agcatcaccgaaattaacgtcgccgcgaccgttaaggaaatccgccgcgccctcgtcgat
gccgacgtaaactacaaggtagccaaggaagtaaccgacaagatcaaggacgaggccatg
ggccgcgacgtgctcatcagcgtgtcgccgggccagctcatgaccaagatcgtctacgat
gagctcacccagctcatgggcggcgaaaagcaggacatcgtcatcaagggcgagccggcc
gtggtgctgctgtcgggtctgcagggctcgggcaaaaccacgtttgctggtaagctggcc
gcttacctcaaaaagcagaaccgcacagtgctgctcgtggcttgcgacgtgtaccgcccc
gccgctatcgaccagctgaaagtgttgggcacgcaggtcgacgtggaggtgtactcagag
cccgagaacaagaacccggtggagatttcgcgcaacgccattgagtacgcgcgcaaaaac
aacaagaaggtcgtcatcatcgacaccgccggccgcctggccgtggatgagcagatgatg
agcgagattgaggccgtgaagcgcgccatcaacccgtcggaaacgctgttcgtggtggat
tccatgaccggccaggacgccgtgaatactgccaaaaccttcaacgaccggctgaacttc
gacggcgtggtgctcaccaagctcgacggcgactcgcgcggtggtgcggccctgagcatc
cgggccgtggtggaaaagcccatcaagttcatctcgacgggtgagaagatggaggccctg
gacatgttctatcccgaccggatggcgcagcggatcctgggcatgggcgacgttatcagc
ctggtagagcgtgcgcagcagcagttcgacgaggacgaggccaagcgcatcaaccagaag
atccgcaaaaaccagttcaacttcgacgacttcctctcccagctggagcaaatcaagaag
atgggcaacctgaaggatctggtgggcatgattccgggcatgagcaaggccatcaaggac
gtagacatcgacgacgatgccttcaagccgattgaggccatcatccagagcatgaccccc
atggagcgcgcccagccggagctgctgaacggctcgcgccgccgccgcctcgccaaaggc
tccggcaccgatatccagcaggtcaacaacctgatgaagcagttcgaggacatgcgcaaa
atgatgcgcaccatgaacaagatgagccagaccaaaggcggcatgcagcaaatggcccgc
atgatgggcatgaaaggcccactgcgctaa
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