Hymenobacter yonginensis: O9Z63_05605
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Entry
O9Z63_05605 CDS
T08743
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hyk
Hymenobacter yonginensis
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyk03032
]
O9Z63_05605 (topA)
03400 DNA repair and recombination proteins [BR:
hyk03400
]
O9Z63_05605 (topA)
Enzymes [BR:
hyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
O9Z63_05605 (topA)
DNA replication proteins [BR:
hyk03032
]
Prokaryotic type
DNA Topoisomerases
O9Z63_05605 (topA)
DNA repair and recombination proteins [BR:
hyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O9Z63_05605 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
PadR
Motif
Other DBs
NCBI-ProteinID:
WBO85720
LinkDB
All DBs
Position
complement(1305088..1307574)
Genome browser
AA seq
828 aa
AA seq
DB search
MVKNLVIVESPAKAKTIEGYLGKDFVVKSSFGHVRDLPKDNNAIDVANNFKPTYVVSADK
REIISQLKKLAKEAETVWLASDDDREGEAISWHLAETLNLTGSSKTRRIVFREITKNAIL
HAIDNPREIDLNLVNAQQARRVLDRLVGFELSPVLWKKVKTGLSAGRVQSVAVRLVVERE
REINQFKVSSAYRITARLDAGKGAVLEADLPTRYKTREEAEAFLARCAGAEYRIENLEKK
PGKRSPAPPFTTSTLQQEASRKLGFSVAQTMSVAQKLYEAGKISYMRTDSVNLSQDALTA
AQVEISRAYGAEYAQTRLYKTKSASAQEAHEAIRPTDFALMKAGSDSQEQRLYDLIRKRA
MASQMADAQIERTVATIGISTQPGVTLTATGEVITFEGFLKAYSESKDEEEQDEATTESS
FSRGLPPLTVGQLMPLLQLRGVERYAAPAARYTEASLVKKLEEMGIGRPSTYAPTISTIQ
KRGYVEKDTREGKERKFHVLTLEGSEVKTEVKTETYGADKAKMFPTDTAMVVNDFLVEHF
PVIVDFQFTAKVEGEFDRIADGEEQWTDMLAGFYGTFHETVERGKDIERNTLGSNREIGL
HPETGQKLTARLGRFGPYVQIEPKEGAPEDEKAVYASLRKGQFIENITLEEALELFKLPR
VVGEFEEKSMTAALGRFGPYIRHDSKFYSLTKEQDPHTITAPEAIELIENKRKTDAERLI
KTFEGRDDVQVLNGRFGPYIVVGKKNVKIPKGEEPADLTLERCLELGELTPDKPAKGGRF
AKKAPAADKADAADKPAKKPAAKKPAAKKPAAKKAAGTTAKKPAAKAK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaaatctagtcatcgtcgaatcccccgcgaaagccaaaaccattgaaggctat
ctgggcaaggatttcgtcgtcaaatcgtctttcgggcacgtccgtgacctgccgaaggat
aacaatgccattgacgtagccaacaacttcaagcccacctacgtggtgtcggccgacaag
cgggagattatcagccagctcaagaagctggccaaggaggccgaaaccgtctggctggcg
agtgacgatgaccgggagggcgaggctatttcatggcacctggccgaaaccctgaacctg
accggcagctccaagacgcgccgcatcgtgttccgtgaaatcaccaagaacgccatcctg
cacgccatcgacaacccccgggaaatcgacctgaacctggtgaatgcccagcaggcccgc
cgcgtcctcgaccggctggtgggcttcgagctgagcccggtgctctggaagaaagtgaaa
acgggcctttcggccggccgcgtgcagagcgtggccgtgcggctggtggtggagcgcgag
cgggaaatcaaccagttcaaagtgtcgtcggcgtaccggattacagcgcgcctggacgcc
ggcaaaggtgctgtgctggaagccgacctgcccacgcgctacaaaacccgcgaagaggcc
gaagctttcctggcccgctgcgccggcgccgagtaccgcatcgagaacctagagaaaaag
cccggcaagcgcagccccgcgccgcccttcaccacgtctacgctgcagcaggaagcttcg
cgcaagctcggcttctcggtggcccagacgatgagcgtggctcagaagctctacgaagcc
ggtaaaatctcctacatgcgtaccgactcggtgaacctctcgcaggacgccctgacggcc
gcgcaggtggaaatcagccgcgcatacggggccgaatatgcccagacccgtctgtacaaa
acaaagtcggcctcggcgcaggaagctcacgaagccatccgccccaccgacttcgcgctg
atgaaagccggctccgactcgcaggagcagcgcctttacgacctgatccggaagcgggcc
atggcctcgcagatggccgacgctcagattgagcggacggtggccaccatcggcatcagc
acccagcccggcgttacgctcacggctacgggggaggtcatcaccttcgagggtttcctg
aaagcctacagcgaaagcaaggacgaggaagagcaggacgaagccaccacggaatcgtcg
ttttcgcgcggcctgccgcccctgaccgtgggccagctgatgccgctgctgcagctgcgc
ggcgtggagcgctacgccgccccggctgcccgctacacggaagcctcgctggtgaaaaag
ctggaggaaatgggcatcggccgaccttccacctacgcgcctaccatcagcaccattcag
aagcgcggctacgtggaaaaagacacccgcgaaggcaaggagcgcaagttccacgtgctg
acgctggaaggcagcgaggtgaaaaccgaagtcaaaaccgaaacctacggggctgacaag
gccaagatgttccccaccgacaccgccatggtggtgaacgacttcctggtggagcacttc
ccggtaattgtggacttccagttcacggccaaagtggaaggcgagtttgaccgcattgcc
gacggcgaagagcagtggaccgacatgctggccggcttctacggcacgttccacgagacg
gtggagcgcggcaaggacatcgagcgcaacacgctgggcagcaaccgcgaaatcgggctg
caccccgaaaccggccagaagctgacggcccgcctcggccgctttggtccctacgtgcag
atcgagcccaaagaaggcgcgcccgaggacgaaaaggcggtatacgccagcctgcgcaaa
gggcagttcattgagaatatcacgctggaagaggcgctggagctgttcaagctgccccgc
gtggttggcgagtttgaggagaaatccatgacggccgccctgggccgtttcggcccctac
atccgccacgacagcaagttctactcgctcaccaaggagcaggacccgcacaccatcacg
gcgcccgaggccattgagctgattgagaacaagcgtaagaccgacgccgagcgcctcatc
aagaccttcgagggccgcgacgacgtgcaggtgctgaacggtcgtttcgggccgtacatc
gtggtgggcaagaaaaacgtgaagattccgaaaggcgaagagccggccgaccttacgctg
gagcgctgcctggagttgggcgagctgacgcccgacaagcccgccaagggtggccgcttc
gccaagaaggcccccgccgccgacaaggccgacgccgccgacaagcccgcgaaaaaaccc
gccgccaagaagccggcagccaaaaagcccgccgcgaaaaaggctgctggtactaccgcc
aaaaaaccggctgccaaagccaagtag
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