Hymenobacter yonginensis: O9Z63_08845
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Entry
O9Z63_08845 CDS
T08743
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hyk
Hymenobacter yonginensis
Pathway
hyk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O9Z63_08845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyk03019
]
O9Z63_08845
Enzymes [BR:
hyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O9Z63_08845
Messenger RNA biogenesis [BR:
hyk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O9Z63_08845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
AAA_22
AAA_30
Utp25_C
UvrD-helicase
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WBO86624
UniProt:
A0ABY7PUU4
LinkDB
All DBs
Position
2014284..2015735
Genome browser
AA seq
483 aa
AA seq
DB search
MIFDDLNLIEPILRALHEEGYTTPTPIQQQAIPQVLEGHDLLGVAQTGTGKTAAFTVPIL
QILHQTAQVERHAPGRIRCLVLTPTRELAIQIGESFKAYGRHLPKLRSTVIFGGVGQHPQ
VQVLKRGVEVLIATPGRLLDLMNQGFIDLRNIEVFVLDEADRMLDMGFIHDIKRILPKLP
ASRQTLFFSATMPGQIQELAATILRPNPVKVAVTPVSSTADTVTQGVYLVEKNDKPALLE
HVLQNQEIRRVLVFTRTKHGADKVVKTLEKANIPAEAIHGNKSQNHRQRALSSFKAGTTR
VLVATDIAARGIDVDELTHVINYEVPNEPETYVHRIGRTGRAGAFGTAFTFVEDEERAYL
QDIQKLIRRQIDLIEDHPYTTRSVAPVPLHGGAPIKRPKGPAGRPPRPGREGGGGGQGGG
RAPRQGQQSGAPRGGQERGASGGHLSSSAASSRPAGERTPGSSQGSGSGQRRFRGGNGGG
RPQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgacgaccttaaccttattgagcctatcctgcgtgccctgcacgaggaaggc
tacactactcccacgcctattcagcagcaagccattccgcaagtgctggaaggccacgat
ctgctgggtgtcgcccagaccggcaccggcaaaaccgccgctttcaccgttccaattctg
cagatcctgcaccagacggctcaggtagagcgccacgcgcccggccgcatccgttgcctg
gtgctcactcctacccgcgagctggctatccagatcggggaaagcttcaaggcctatggc
cgccacctgcccaagctgcgctccaccgtcatctttggcggcgtaggtcagcacccgcag
gtgcaggtgctcaagcgcggcgttgaggtgctcatcgccacccccggccgcctgctcgac
ctgatgaaccagggtttcatcgacctgcgcaacatcgaagtatttgtgctggacgaagcc
gaccgcatgctcgacatgggcttcatccacgatatcaagcgcatcctgcccaagctgccg
gcctcgcgccagacgctgttcttctcggctaccatgcccggccagattcaggagctggcc
gctaccatcctgcgccccaacccggtgaaagtggccgtaacgcccgtttccagcaccgcc
gatacggttacgcagggcgtgtacctggtagaaaagaacgacaagccggcccttctagag
cacgtgctgcaaaaccaggaaatccgccgcgtactggtgttcacgcgcaccaagcacggc
gccgacaaggtggtgaagacgctggagaaggccaacattccggccgaagccatccacggc
aacaaaagccagaaccaccgccagcgggccctcagcagcttcaaggccggcaccacccgc
gtgctggtagccaccgacattgccgcccgcggcatcgacgtggatgagctgacccacgtt
atcaactacgaggtacccaacgagcccgaaacctacgtgcaccgtatcggccggacgggc
cgcgccggggccttcggcacggctttcacgtttgtggaagacgaggagcgcgcctacctg
caggatatccagaagctgattcgtcggcagatcgacctaattgaagaccacccctacacc
acccgctcggtggccccggtgccgttgcacggcggcgcgcccatcaagcggccgaaaggc
ccggctggtcgcccaccgcggcccggccgcgaaggcggcggcggtggccagggtggcggt
cgggcgccgcgccagggccagcagagcggcgccccccgcggcggccaggaacgcggcgcc
agtggcggccacctcagcagctccgcggcttcgtcgcggccggctggtgagcggacgcct
ggcagcagccagggctccggctcgggccagcgccgtttccgcggcggcaacggcggcgga
cgcccgcagtag
DBGET
integrated database retrieval system
