Hymenobacter yonginensis: O9Z63_08865
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Entry
O9Z63_08865 CDS
T08743
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hyk
Hymenobacter yonginensis
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hyk01002
]
O9Z63_08865
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyk01011
]
O9Z63_08865
Peptidases and inhibitors [BR:
hyk01002
]
Cysteine peptidases
Family C82
O9Z63_08865
Peptidoglycan biosynthesis and degradation proteins [BR:
hyk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
O9Z63_08865
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WBO86358
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Position
complement(2018601..2020388)
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AA seq
595 aa
AA seq
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MNSPFRPAFFSTLLFWLMSLTMLASATSCSQEQKAQIKEALPGTPAKAGGPQPILDSVYV
VRAMNAEPKFKDQVEWAKKFYRERQFRLGWFRNHELVPQAKTMLGVINKAADEGLDPKEY
KTRDFDKLFADLEGVQADSTKRNALEKEIDVALSGTYFNWASDFYRGTVDPRAVKTIDWQ
VKRNKIKLHKALMTILQERESTYPYYEFEPLHPEYEQLKKALADYRALQRNGGWPTLPAT
TKLKPGQASPAVATLRQRLLGTKAAPAVTLAATASAETVPARTVANSPAAPTPTAAAPAE
KYDAELVQAVKAFQSQNGLNPDGVVGGETLRLLNIPVAQRIDQLILNMERWRWIPKKFEP
DYLLVNIPDYKLHVVEGNKEVFDMRVIVGKALNATPVFSDKMEYVVLAPYWNVPYSIIDK
EMRPKLAANAQSYLDRLDMEVVKGSGAKATPVDPNSINWASLTPATWKYTLRRRPGPKND
LGDVKFIFPNSNDVYLHDTPHDELFSQAKRGFSHGCVRVAEPLKLAEYLLRNKPGWDMTK
IEETIAGRKELYVNLPKHVPVYLVYFTSWVDEAGNVNFRDDIYGHDKSLAKEYFN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaccgttccgtccggctttcttctccaccttgttgttctggctcatgagcctc
acgatgctggcatctgctacttcgtgcagccaggagcaaaaggcccagatcaaggaagcc
ctgcccggcactccggccaaagccggtgggccgcagcctattctcgacagcgtatatgtg
gttcgcgccatgaatgccgaaccaaaattcaaggaccaggttgagtgggccaagaagttc
taccgcgagcgacagttccggttgggctggttccgcaaccacgagctggtgccccaggcc
aaaaccatgctcggggtcatcaacaaggccgccgatgaaggcctggatcctaaagagtac
aaaaccagggacttcgacaagttatttgccgatctggaaggcgtacaggccgattccacc
aagcgcaatgcgctggaaaaggagattgacgtagccctttccggcacctatttcaactgg
gcttccgacttctaccggggcaccgtagacccgcgcgccgtcaaaaccatcgactggcag
gtgaagcgcaacaagatcaagctgcacaaggccctgatgacgatcctgcaggagcgggaa
agcacgtatccttattatgagtttgagccgctgcaccccgagtacgagcagctgaaaaag
gcgttggccgactaccgcgccctgcagcgcaacggcggctggcccacgctgcccgccacc
accaagctcaagcccgggcaggcctcgccggccgtggccacgctgcgccagcgtctgctg
ggtaccaaagcagcaccagccgtcacgcttgccgccaccgcttctgcggagactgtgccg
gcccgcaccgtagccaacagccccgccgcgccaactccgactgctgccgcgccggccgag
aaatacgacgccgagctggtgcaggccgtgaaggcttttcagagccagaacggtctcaac
cccgatggggtagtggggggcgaaacgctccgtctgctcaacataccggtggctcagcgc
atcgatcagctcatcctgaacatggagcgctggcgctggattccgaaaaagtttgagccc
gattacctgctggtgaacatccccgactacaagctgcacgtcgtcgaaggcaacaaggaa
gtgttcgatatgcgcgtcatcgtgggcaaggcgctcaacgctacgccggtcttttccgac
aagatggagtacgtggtactggcaccttactggaacgttccctacagcattatcgataag
gagatgcgccccaagttggccgccaatgcccagtcctacctcgaccgcctcgacatggaa
gtggtgaaaggctcgggtgccaaggctacccctgttgaccccaacagcatcaactgggcc
agcctcacgccggccacctggaagtacacgctgcgccgccggccgggccccaaaaacgac
ctcggcgacgtgaagtttatcttcccgaactccaacgacgtgtacctccacgacaccccc
cacgacgagctgttcagccaggccaagcgcggcttcagccacggctgcgtgcgggtcgcc
gagcccctcaagctggccgagtacctgctccgcaacaagcccggctgggacatgaccaag
atcgaggaaacgattgccggccgcaaggagctctacgtaaacctgcccaagcacgtgccc
gtgtacctggtctacttcacctcgtgggtggatgaagccggcaacgtgaacttccgcgac
gacatctacggccacgataaatccctcgccaaagaatacttcaactag
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