Hymenobacter yonginensis: O9Z63_08965
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Entry
O9Z63_08965 CDS
T08743
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hyk
Hymenobacter yonginensis
Pathway
hyk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O9Z63_08965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyk03019
]
O9Z63_08965
03009 Ribosome biogenesis [BR:
hyk03009
]
O9Z63_08965
Enzymes [BR:
hyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O9Z63_08965
Messenger RNA biogenesis [BR:
hyk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O9Z63_08965
Ribosome biogenesis [BR:
hyk03009
]
Prokaryotic type
rRNA helicases
O9Z63_08965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WBO86377
LinkDB
All DBs
Position
complement(2040159..2042075)
Genome browser
AA seq
638 aa
AA seq
DB search
MENETVKTKFSELTLSEEMQRAITEVGYEEASPIQAAGIPVLLQGRDVIGQAQTGTGKTA
AFSIPAIERIDTDSREVQCLVLCPTRELAVQVSGEIQKLGKYKRGLAVVPIYGGSSYDRQ
FRALERGVQIVIGTPGRVMDHIERGTLKLEHCKMIILDEADEMLDMGFRDDIETVLKKMP
EDRQTVFFSATMSKPIMEMTKRYQKDPQIVKVNHQEMTVTNIEQSYFEVRGPQKKDVLTR
LIDMYNIKSGIVFANTKRMVDEIVGDLQAKGYFAEGLHGDMGQQQRQNTLDKFRKGTLEI
LVATDVAARGIDVDNVEVVVNYDLPADEEYYVHRIGRTGRAGKQGKAFTFVSGRDIYKLR
DIMRFTKATIKQERVPSFEDVSEVKTTLMLNSIKEVIEKGNLDKYVARVQRLIDQDQEDG
ITSLDVAAALLKMTMKEDKRAQESLDASRTQGAARAGFTRLFVTMGKKDRLHPRDIVDLI
AENTSLTASKVGDIALYDKFSFVEVPNEFVEEVVSQLGRSSIQGRPVAFNIATPRQEGDA
QQEGGNRGGFGGERPRRGPGGFGGGERREGGGSYGGNRGGSYGDRREGGSSYGGNRGGGS
YGGNRGGGSYGGGSYGGGNRREGGSSYGGGYKGKRDDS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaaaccgttaagaccaagttcagcgagctgaccctctctgaagaaatgcag
cgtgccatcaccgaagttggctacgaagaagcatcccccatccaggccgccggcattccg
gtcctgctccagggccgcgacgtaatcggccaagcccagaccggcaccggcaaaaccgcc
gccttctccatccccgccattgagcgtatcgacaccgattcgcgcgaagtacagtgcctc
gtgctctgccccacccgcgagctggcggtgcaggtttcgggcgaaatccagaaactgggc
aaatacaagcgtggtctggccgtcgtgccgatctacggtggctcttcttacgaccggcag
ttccgcgctctggagcgtggcgtgcagatcgtaattggtacccccggccgcgtaatggac
cacatcgagcgtggtacgctcaagctggagcattgcaaaatgatcattctcgatgaggcc
gacgaaatgctcgacatgggcttccgcgacgatatcgagacggtgctcaagaaaatgccc
gaagaccgccagacggtattcttctcggctaccatgagcaagccgatcatggagatgacc
aagcgctaccagaaggatccgcagatcgtgaaggtaaaccatcaggaaatgacggttacc
aacatcgagcagagctacttcgaggtgcgtgggccgcagaaaaaagacgtgctaacccgc
ctcatcgacatgtacaatatcaagtcgggcatcgtcttcgccaacacgaagcgtatggtg
gacgagattgtgggcgacctgcaggccaaaggctacttcgccgaaggcctgcacggcgac
atgggccagcagcagcgccagaacacgctggataaattccgcaaaggcaccctcgaaatc
ctggtagctaccgacgtagccgcccgcggcatcgacgtggacaacgtggaagtggtagta
aactacgacctgcccgccgacgaggaatactacgtgcaccgcatcggccgcaccggccgc
gccggcaagcagggtaaagccttcaccttcgtgagcggccgcgacatctacaagctgcgc
gacatcatgcgcttcaccaaagctaccatcaagcaggagcgcgtgccgtccttcgaagat
gtgtcggaggtgaaaaccacgctgatgctcaactccatcaaggaggtaattgagaaaggc
aacctcgacaagtacgtggcccgcgtgcagcgcctcatcgaccaggaccaggaggatggt
atcacgtccttggacgtagccgccgccctgctcaagatgacgatgaaggaagacaagcgc
gcccaggaaagcctcgacgccagccgtacccaaggtgccgcccgcgccggcttcacccgt
ctgttcgtgacgatgggtaagaaggatcgcctgcacccccgcgacatcgtagacctgatt
gccgaaaacaccagcctcacggccagcaaagtcggcgatattgccctttacgacaagttc
agcttcgtggaagtaccgaatgagttcgtggaagaagtggtgagccagctcggccgcagc
tccatccagggtcgtccggtagccttcaacattgctacgccccgccaggaaggcgacgcg
cagcaggaaggcggtaaccgcggcggcttcggcggcgagcgtcctcgtcggggcccgggt
gggttcggcggtggcgagcgtcgcgaaggcggcggcagctacggcggcaaccgcggcggt
agctacggcgaccgtcgggaaggtggcagcagctacggcggcaaccgcggtggcggctcc
tacggtggcaaccgcggtggcggtagctacggcggcggctcctacggtggcggtaaccgt
cgggaaggtggcagcagctacggcggcggctacaaaggcaagcgcgacgacagctaa
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