Hymenobacter yonginensis: O9Z63_13265
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Entry
O9Z63_13265 CDS
T08743
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hyk
Hymenobacter yonginensis
Pathway
hyk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O9Z63_13265 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyk03019
]
O9Z63_13265 (recQ)
03400 DNA repair and recombination proteins [BR:
hyk03400
]
O9Z63_13265 (recQ)
Enzymes [BR:
hyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O9Z63_13265 (recQ)
Messenger RNA biogenesis [BR:
hyk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O9Z63_13265 (recQ)
DNA repair and recombination proteins [BR:
hyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O9Z63_13265 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
WBO86646
LinkDB
All DBs
Position
3089310..3091505
Genome browser
AA seq
731 aa
AA seq
DB search
MPAVNTAVSSTPDLKGKLKEVFGYGQFRGTQEAIIQNVIEGHNTFVIMPTGAGKSLCYQL
PALVLPGTAIVISPLIALMKNQVDQLNAFGVNAQFLNSTLTKAEMNRVKKDVISGEVKLL
YVAPESLTKDETIEFLQKATISFVAIDEAHCISEWGHDFRPEYRRIRGIIDNIGQVPIIA
LTATATPKVQLDIQKNLQMDDASVFKTSFNRTNLYYEVRPKHNTKKQLIQYVKQRKGLAG
IIYCLSRKKVEEIAELLKVNDVRALPYHAGLDPHVRMANQDAFLNEDADVIVATIAFGMG
IDKPDVRFVIHYDTPKSIEGYYQETGRGGRDGLDGDCLMFYSYDDIVKLEKFNKDKPVTE
RDNSKLLLQEMANYADSAVCRRKQLLHYFGETYPTDCGFCDNCKHPKERFEAKDEVAMAL
KAVVQTEQRFGLDHIGTVLMGMNNAHVESYGHNGLPIYGQGKHKDAQFWHSLLRQCLIFG
LLEKDIESFGVVKITDKGMEFIDNPHSIKLTKDHDYDEEVKEELEQEEVQQAAGHDETLF
QMLKDLRKKMAKEKNLPPYVLFQDPSLKEMATTFPLKMDDLAHVGGVGQGKATKFGTPFL
ALIKKYVDDNDIETATDVVVKSAVNKSKIKIYIIQQIDKKMDLEEIASSKGIDMRELMEE
IEHICYSGTKLNLDYYIDGVLDEDRQEEIYDYFMSASTDNIAVALKELGTDEYTEEDLRL
MRIKFLSEVAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgtgaataccgcagtcagttcaacacctgatttgaagggcaaattaaaggaa
gtttttgggtacgggcagttccgtggtacgcaggaagccattatccagaacgtcatcgag
ggccacaacaccttcgtaattatgcccaccggcgccggcaagagcctttgctatcagctg
cccgcgctggtgctgcccggcacggccattgttatttcgcccctgattgccctgatgaaa
aaccaggtcgatcagctcaacgccttcggcgtgaatgcccagtttctgaactccacgctc
accaaggcggagatgaaccgggtgaagaaggacgttatcagcggcgaggtgaagctgctg
tacgtggcgcccgaaagcctcaccaaagacgaaaccatcgagtttctgcagaaagccacc
atcagcttcgtagccattgatgaggcccactgcatctcggagtggggccacgacttccga
cccgagtaccgccgcatccggggcatcatcgacaacatcgggcaggtgcccatcattgcc
ctcacggccacggccacgcccaaagtgcagctggacatccagaaaaacctgcagatggac
gacgcctcggtgttcaagaccagcttcaaccgcaccaacctctactacgaggtgcggccc
aagcacaacaccaagaagcagctgattcagtacgtgaagcagcgcaagggcctggccggc
atcatctattgcttgagccgcaagaaagtagaagaaattgccgagctgctaaaggtcaac
gacgtgcgggccctgccctaccacgccggcctcgacccgcacgtacgcatggccaaccag
gacgccttcctcaacgaagacgccgacgtcattgtggctaccattgccttcggcatgggc
atcgacaagcccgatgtgcgcttcgtgattcactacgacacgcccaagagcatcgagggt
tactaccaggaaaccggccgcggcggccgcgacggcctcgacggcgactgcctgatgttc
tacagctacgacgacatcgtgaagctggagaagttcaacaaggacaagcccgtgacggag
cgcgacaacagcaagctgctgctccaggaaatggccaactacgccgactcggccgtgtgc
cgccgcaagcagctgctgcactacttcggcgaaacctacccgaccgactgcggcttctgc
gacaactgcaagcaccccaaggagcggtttgaggccaaggatgaagtagcaatggccctg
aaggccgtggtgcagactgagcagcgcttcggcctcgaccacatcggtaccgtattgatg
ggcatgaacaatgcgcacgtggagagctacggccacaacggcctgccgatctacggccag
ggcaagcacaaagacgcgcagttctggcactcgctgctgcgccagtgcttgattttcggt
ttattggagaaggatattgaaagctttggcgttgtaaaaatcaccgacaagggtatggaa
ttcatcgacaatccccattcgatcaagctcaccaaagaccacgactacgacgaggaggta
aaggaggagctggagcaggaagaggtgcagcaggccgccggccacgacgaaacgctgttc
cagatgctcaaggacctgcgcaagaagatggccaaggagaaaaacctgccgccgtacgtg
ctcttccaggatccaagcctgaaggaaatggccaccaccttcccgctcaagatggacgac
ctcgcccacgtgggcggcgtcgggcagggtaaggccaccaagttcggcacgccgttcctg
gctttgatcaagaagtacgtcgacgacaacgacatcgaaaccgccaccgatgtggtggtg
aagtcggccgtcaacaagtcgaaaatcaagatctacatcattcagcagatcgacaagaag
atggacttggaggaaattgcgtcctcgaagggcatcgatatgcgcgagctgatggaggaa
atcgagcacatctgctactccggcaccaagctcaacctcgactactacatcgacggcgtg
ctggacgaagaccgccaggaggaaatctacgactactttatgtcggccagcaccgacaac
attgccgtggccctcaaggagctcggcaccgacgaatacaccgaggaagacctgcgcctg
atgcgcatcaagtttctgagcgaggtggcgaactaa
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