Hymenobacter yonginensis: O9Z63_17415
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Entry
O9Z63_17415 CDS
T08743
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hyk
Hymenobacter yonginensis
Pathway
hyk03410
Base excision repair
hyk03430
Mismatch repair
hyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O9Z63_17415 (recJ)
03430 Mismatch repair
O9Z63_17415 (recJ)
03440 Homologous recombination
O9Z63_17415 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyk03400
]
O9Z63_17415 (recJ)
DNA repair and recombination proteins [BR:
hyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
O9Z63_17415 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
O9Z63_17415 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
O9Z63_17415 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WBO84144
UniProt:
A0ABY7PN81
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All DBs
Position
4042326..4044047
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AA seq
573 aa
AA seq
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MEKRWIRKPAPDAEKVRHLADALRVKEAIVALLCQREISSFEEARAYFRPDLSTLPDPLL
MRDMDRAVARLREALHAGQKVLVFGDYDVDGTTSVALVYSFLLPYFGPERIDYYIPDRYK
EGYGVSEAGIDFAAANDYALIIALDCGVKSVDKVAYANDRGVDFIICDHHLPGTELPAAV
AVLDPKRADCPYPFKELSGCGVGFKLMQAFAEDQGLDEAPLYDLLDLVAVSIAADIVPIV
GENRTLAYHGLRLLNDPQRPQRAGLDALRELAGLQTAELNISSLVFGFAPRINAAGRMGD
AKRSVAMLLAGSKQEAFDKAAVVDKTNQERRGFDTSITKEALDMIEADALFQDAHTTVLF
KQDWHKGVVGIVASRCLDKYYRPTIILTESNGKATGSARSVAGFDVHQAIEECADLLDQY
GGHMYAAGLTLPVENVPAFREKFERIVAGRIRPEQMIPPVDIDAELPLHEVTRNFHKLLC
QMEPFGPGNSNPTFMARNVYAAPDSARVVGNSHLKLALTQDGHHVVDAIGFGLAEHLPQI
QQGQPFSVCYTVEINEYRGVKTLQLRVKDIRWE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgatggattcgcaagccagcccccgacgctgaaaaagtccggcacctggcc
gacgccctgcgcgttaaggaagccattgtagcgctgctctgccagcgcgaaatcagctct
ttcgaggaagcccgcgcctacttccggcccgacctgagcaccctgcccgacccgctgctg
atgcgcgacatggaccgcgccgtggctcgcctgcgcgaagccctgcacgccggccagaag
gtgctcgtgttcggcgactacgacgtggacggcaccacctccgtggcgctggtgtacagc
ttcctgctgccgtatttcggcccggagcgcatcgactactacattccggaccgctacaaa
gaaggctacggcgtgtcggaggccggcatcgacttcgcggccgccaacgactacgcgctg
attattgcgctggactgcggcgtgaaatcggtggataaggtggcctacgccaacgaccgg
ggcgtggacttcatcatctgcgaccaccacttgccgggcaccgagctaccagccgccgtg
gccgtgctcgaccccaagcgcgccgactgcccttacccgttcaaggagctgagcggctgc
ggcgtaggcttcaagctgatgcaggcctttgccgaagaccagggcctcgacgaagccccg
ctctatgacctgctcgacctggtagctgtgagcattgccgcggatatcgtgccgattgtg
ggcgaaaaccgcacgctggcctaccacggcctgcgcctgctcaacgacccccagcgccct
caacgcgccggcctcgacgccctgcgcgagctggccggcctgcaaaccgcggagctgaac
atcagcagcctggtatttggcttcgcgccccgcatcaacgctgccggccgcatgggcgac
gccaaacgctcggtggctatgctgctggccggcagcaagcaggaagccttcgacaaggcc
gccgtggtggataaaaccaaccaggagcgccgcggcttcgataccagcatcacgaaggag
gccttggatatgatcgaggccgatgcgctgttccaggacgcccacaccacggtgctgttc
aagcaggactggcacaagggcgtggtgggcatcgtggcctcgcgctgcctcgacaagtac
taccggcccaccatcatcctcaccgaaagcaacggcaaagccaccggctcggcgcgctct
gtggcgggctttgacgtgcaccaggctattgaggagtgcgccgatttgctcgaccagtac
ggaggccacatgtacgcggccggcctcacgctgcccgtggaaaacgtgcctgctttccgt
gagaagttcgagcggatagtggcgggccgcatccggccggagcagatgattccgcccgtg
gatattgacgccgaactgccgctgcacgaggtgacgcgcaatttccacaagctgctgtgc
cagatggagcctttcgggcccggcaacagcaaccccaccttcatggcccgcaacgtgtac
gccgcccccgattcggcgcgcgtcgtgggcaactcgcacctcaagctggccctcacccag
gacggccaccacgtcgtggacgccatcgggtttggcctggccgagcacctgccccagatt
cagcagggccagccgttcagtgtgtgctacacggtggaaatcaacgagtaccgcggcgta
aaaaccctgcagctccgcgtgaaggacattcgctgggagtaa
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