Hymenobacter yonginensis: O9Z63_17975
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Entry
O9Z63_17975 CDS
T08743
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hyk
Hymenobacter yonginensis
Pathway
hyk00521
Streptomycin biosynthesis
hyk00523
Polyketide sugar unit biosynthesis
hyk00525
Acarbose and validamycin biosynthesis
hyk00541
Biosynthesis of various nucleotide sugars
hyk01100
Metabolic pathways
hyk01110
Biosynthesis of secondary metabolites
hyk01250
Biosynthesis of nucleotide sugars
Module
hyk_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
O9Z63_17975 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
O9Z63_17975 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
O9Z63_17975 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
O9Z63_17975 (rfbB)
00525 Acarbose and validamycin biosynthesis
O9Z63_17975 (rfbB)
Enzymes [BR:
hyk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
O9Z63_17975 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
WBO84247
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All DBs
Position
4163647..4164699
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AA seq
350 aa
AA seq
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MKIIITGGAGFIGSHVVRLFVTKYPEYQILNLDALTYAGNLENLRDIENAPNYRLVKGDI
TDQAFVDNLFAIEQPDAVIHLAAESHVDRSITDPLAFVKTNVLGTVHLLNAAKNLWKPLN
YEGKVFYHVSTDEVYGSLDFGPEMFTEETSYDPRSPYSASKASSDHFVRAWHHTYHMPVK
LSNCSNNYGPNHFPEKLIPLAIHRIQHGEAIPVYGKGENVRDWLFVKDHATAIDAVFHKG
TVGETYNIGGVNEWANLELIHLLCDTLDEKTGKEKGTSRKLIKFVTDRAGHDLRYAIDSS
KIMNELGWKPSVTFEQGLSQTVDWYLENQEWLNNVTSGQYQEYYQKQYNR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcatcatcaccggcggggccggcttcattgggtcgcacgtggtgcgcctgttc
gtgaccaagtatccggagtatcagattctgaacctggatgcgctgacctacgccggcaac
ctggaaaacctgcgcgacattgaaaacgcgcccaactaccgtctggtgaaaggtgacatc
accgatcaggcctttgtggacaacctgtttgccatcgagcagcccgacgccgtgattcac
ctggctgccgaaagtcacgtggaccgcagcatcaccgacccactggccttcgtgaagacc
aacgtgctgggcacggtgcaccttctgaacgccgccaaaaacctgtggaagcccctcaac
tacgagggcaaggtgttctaccacgtaagcaccgatgaggtgtatggttccctggacttc
ggccccgaaatgttcacggaggaaaccagctacgacccccgctcgccctactcggcctcc
aaggcgtcgtcggaccactttgtgcgggcctggcaccacacctaccacatgccggtgaag
ctgagtaactgctccaacaactacggccccaaccacttccccgagaagctgattccgctg
gctatccaccgcattcagcacggcgaggccattccggtgtacggcaagggcgaaaacgtg
cgcgactggctgttcgtgaaagaccacgccaccgccatcgacgctgtgttccacaagggc
actgtgggcgaaacctacaacatcggcggcgtgaacgagtgggccaatctggagctgatt
cacttactctgcgacacgctggacgagaaaaccggcaaagagaaaggcacctcccgcaag
ctcatcaagttcgtgacggaccgcgccggccacgacctgcgctacgccatcgactccagc
aaaatcatgaacgagctgggctggaagccctccgtgacgttcgagcagggcctgagccag
acagtggattggtacctggaaaaccaggagtggctgaacaacgtcaccagcggccagtat
caggagtactaccagaagcagtataaccgctag
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