KEGG   Hymenobacter yonginensis: O9Z63_18245
Entry
O9Z63_18245       CDS       T08743                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
hyk  Hymenobacter yonginensis
Pathway
hyk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hyk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    O9Z63_18245 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyk03400]
    O9Z63_18245 (uvrA)
DNA repair and recombination proteins [BR:hyk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     O9Z63_18245 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      O9Z63_18245 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 DnaJ_CXXCXGXG AAA_16 RsgA_GTPase AAA_25 AAA_21 CA109-like Viral_helicase1 Parb-CE
Other DBs
NCBI-ProteinID: WBO84299
LinkDB
Position
4230705..4233833
AA seq 1042 aa
MAKKSTAASVSSLAAPKPAAAPKPARSAKAAKPTATTAELKAKPTKAPKEAKALKSAVAD
NATEHSTAAVQAVPRQEQVSEAVLENQARIQGQLLGPADLEAPYIEVYGAREHNLKNVSV
KIPRGRLVVFTGISGSGKSSLAFDTIYAEGQRRYMETFSAYARSFMGGLERPDVDKIEGL
SPVISIEQKTTSRNPRSTVGTITEIYDFLRLLYARTAEAFSYATGQKMIRQSDDQIINYI
LKEYDGRKMVVLAPVVKGRKGHYRELFQQVAKLGFTKVRVDGELLDLTPKMQVDRYKIHD
IEIVIDRLVVKEEDRFRLSGSVQNALTQGKGTMLVLDADKKKDNTQFFSRFLMDPATGIA
YDDPAPNTFSFNSPYGACPTCNGLGEVQEITEETVMPDKKLSISRGGIAPLGEYRDIWIF
QQLGLILKKHKASLSTPIEKLPADLVERLLYGVPEDEDADPKKANYTEPFEGIIPFLRRQ
MESESDNIREWIQQYTQAKECPECHGYRLKKESLHFKIADHHIGQLSVMDLSELAAWFEG
LEDRLSERQNLIARELLKEIRKRIGFLLEVGLDYLNLHRSVRTLSGGESQRIRLATQIGT
QLVGVLYIMDEPSIGLHQRDNERLIKALQHLRDLGNSVIVVEHDKDMILHADHVLDIGPG
AGIHGGQIVAQGTPSEIFTSGSLTSQYLSGQKHIELRKKKRAGEGNELVLRGAKGHNLKN
VTAKFPLGKLIAVTGVSGSGKSSLIHDTLYPILNQHFFNAKREPLAYDKIEGLEFIDKVI
EVDQSPIGRTPRSNPATYTGVFTEIRQLFANLPEAKIRGYGPGRFSFNVKGGRCETCEGA
GMRTIEMNFLPDVHVPCETCKGRRYNRETLEVRFKGKSITDVLDMTVEKAVEFFEFQPRI
LRKIQTLNEVGLGYLTLGQQATTLSGGEAQRVKLATELSKKDTGKTFYILDEPTTGLHFE
DINHLSVVLHKLADKGNTVLIIEHNLDLIKVADHLIDIGPEGGGAGGTIVAQGTPEQVAK
SGKGHTSRFLAEELKLSKYAEA
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggccaaaaaatcaaccgccgcttctgtttcttccctcgctgcccccaaaccggccgcg
gctcccaaacctgcccgttcggccaaggcggcgaaacccacggcaactacggctgagctg
aaagccaaacccaccaaggcccccaaagaagctaaagcgctcaagtcagccgttgccgac
aatgccactgagcatagcaccgccgccgtgcaggccgtgccgcgccaggagcaggtgagc
gaggccgtgctggaaaaccaggcccgcatccagggccagctgctgggccccgccgaccta
gaagcgccctatattgaagtgtacggagcccgggagcacaatctcaagaacgtatccgtg
aagattccgcgcgggaggctggtggtgtttaccggcatttcgggctcgggcaagtcgtcg
ttggcgtttgataccatctacgccgagggccagcgccgctacatggaaacgttttcggcc
tacgcccgcagcttcatgggcgggctggagcggcccgacgtggacaagattgagggtctg
tcgccggttatcagcatcgagcagaaaaccacttcgcgcaacccccgctccaccgtcggc
accatcaccgagatttatgacttcctgcgcctgctctacgcccgcaccgccgaggcgttc
agctacgccacgggccagaagatgatccggcagagcgacgaccagatcatcaactacatc
ctgaaagagtacgacggccgcaaaatggtggtgctggctcccgtggtgaagggccgcaaa
ggccattaccgcgagctgttccagcaggtggctaagctgggcttcaccaaagtgcgcgtc
gatggcgagctgcttgacctcacgcccaagatgcaggtggaccgctacaaaatccacgac
atcgaaatcgtcatcgaccgactggtggtgaaggaggaagaccggttccgcctctccggc
tcggtgcagaacgccctcacccaaggcaaaggcaccatgctggtgctcgacgccgacaag
aagaaggacaacacccagttcttctcccgcttcctgatggacccggccaccggcattgcc
tatgatgatccggcccccaacacgttcagcttcaactcgccctacggcgcctgccccacc
tgcaacggcctgggcgaggtgcaggaaatcaccgaagaaacggtgatgcccgacaagaag
ctcagcatcagtcgcggcggtattgcgcccttgggcgagtaccgggacatctggattttc
cagcagctgggcctcatcctgaaaaagcacaaagccagcctcagcacgcccattgaaaag
ctgcccgccgacttggtggagcggctgctctatggcgtgcccgaggacgaggacgccgac
cccaaaaaggccaactataccgagccgttcgagggcatcatcccgtttttgcgccgccag
atggagtcggaatccgacaacatccgggagtggattcagcagtatacccaggccaaggag
tgccccgagtgtcacggctaccgcctcaaaaaggagtcgttgcacttcaagattgccgac
caccacatcgggcagctttcggtaatggacctgagcgagctggccgcgtggtttgagggc
ttggaagaccgcctctcggagcgccagaacctgattgcgcgggagctgctgaaggaaatc
cgcaagcgtatcggcttcctgctggaagtgggcctcgactacctgaacctgcaccgctcg
gtgcgcacgctctcgggcggcgagtcgcagcgcatccgcctggccacccagatcgggacc
cagctggtgggcgtgctctacatcatggacgaacccagcatcggcctgcaccagcgcgac
aacgagcggctcatcaaggccctgcagcatctgcgcgacctgggcaactcggtgattgtg
gtggagcacgacaaggacatgatcctgcacgccgaccacgtgctcgacatcggccccggc
gccggcatccacggcggccagattgtggcccagggcacgccttccgaaatcttcaccagc
ggctcgctcacctcgcagtacctcagcgggcaaaagcacatcgagttgcgcaagaaaaag
cgggccggtgaaggcaatgagctggtgctgcgcggggccaaaggccacaacctgaaaaac
gtaacggccaagtttccattgggcaagctcattgccgtgacgggcgtgtcgggctccggc
aaatcctcgctcatccacgacacgctgtaccccatcctcaaccagcacttcttcaacgcc
aagcgcgagccgctggcgtatgataagattgaggggctggagttcattgataaggtgatt
gaggttgaccagtcgccgattgggcgcacgccgcgctccaacccggccacctacaccggc
gtgttcaccgaaatccgccagctgtttgccaacctgcctgaggccaaaatccggggctac
gggccgggccgcttctccttcaacgtgaagggcgggcgctgcgaaacctgtgagggggct
ggcatgcgcaccatcgaaatgaacttcctgcccgacgtgcacgtgccctgcgaaacctgc
aaaggccgccgctacaaccgcgaaacgctggaagtgcgcttcaaaggcaagagcatcacc
gacgtgctggacatgaccgtggaaaaggccgtggagttcttcgagttccagccccgcatc
ctgcgcaagattcagacgttgaacgaagtaggactgggctaccttaccttgggccagcag
gccaccacgctgtcgggcggcgaggcccagcgcgtgaagctggccaccgagctcagcaaa
aaggacaccggcaagacgttctacatcctcgacgagcccaccaccggcctgcacttcgag
gacatcaaccacctttccgtagtcctgcacaagctcgctgataaaggcaacaccgtcctc
atcatcgagcacaacctcgacctgatcaaggtagctgaccatctcatcgacatcgggccg
gaaggcggcggggcgggcggcaccattgtggcccagggcacgcccgagcaggtggccaag
tccggcaaaggccacaccagccgcttcctggctgaggagctgaagctcagcaagtacgcc
gaggcgtag

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