Hymenobacter yonginensis: O9Z63_18245
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Entry
O9Z63_18245 CDS
T08743
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
hyk
Hymenobacter yonginensis
Pathway
hyk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O9Z63_18245 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyk03400
]
O9Z63_18245 (uvrA)
DNA repair and recombination proteins [BR:
hyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O9Z63_18245 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O9Z63_18245 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_16
RsgA_GTPase
AAA_25
AAA_21
CA109-like
Viral_helicase1
Parb-CE
Motif
Other DBs
NCBI-ProteinID:
WBO84299
LinkDB
All DBs
Position
4230705..4233833
Genome browser
AA seq
1042 aa
AA seq
DB search
MAKKSTAASVSSLAAPKPAAAPKPARSAKAAKPTATTAELKAKPTKAPKEAKALKSAVAD
NATEHSTAAVQAVPRQEQVSEAVLENQARIQGQLLGPADLEAPYIEVYGAREHNLKNVSV
KIPRGRLVVFTGISGSGKSSLAFDTIYAEGQRRYMETFSAYARSFMGGLERPDVDKIEGL
SPVISIEQKTTSRNPRSTVGTITEIYDFLRLLYARTAEAFSYATGQKMIRQSDDQIINYI
LKEYDGRKMVVLAPVVKGRKGHYRELFQQVAKLGFTKVRVDGELLDLTPKMQVDRYKIHD
IEIVIDRLVVKEEDRFRLSGSVQNALTQGKGTMLVLDADKKKDNTQFFSRFLMDPATGIA
YDDPAPNTFSFNSPYGACPTCNGLGEVQEITEETVMPDKKLSISRGGIAPLGEYRDIWIF
QQLGLILKKHKASLSTPIEKLPADLVERLLYGVPEDEDADPKKANYTEPFEGIIPFLRRQ
MESESDNIREWIQQYTQAKECPECHGYRLKKESLHFKIADHHIGQLSVMDLSELAAWFEG
LEDRLSERQNLIARELLKEIRKRIGFLLEVGLDYLNLHRSVRTLSGGESQRIRLATQIGT
QLVGVLYIMDEPSIGLHQRDNERLIKALQHLRDLGNSVIVVEHDKDMILHADHVLDIGPG
AGIHGGQIVAQGTPSEIFTSGSLTSQYLSGQKHIELRKKKRAGEGNELVLRGAKGHNLKN
VTAKFPLGKLIAVTGVSGSGKSSLIHDTLYPILNQHFFNAKREPLAYDKIEGLEFIDKVI
EVDQSPIGRTPRSNPATYTGVFTEIRQLFANLPEAKIRGYGPGRFSFNVKGGRCETCEGA
GMRTIEMNFLPDVHVPCETCKGRRYNRETLEVRFKGKSITDVLDMTVEKAVEFFEFQPRI
LRKIQTLNEVGLGYLTLGQQATTLSGGEAQRVKLATELSKKDTGKTFYILDEPTTGLHFE
DINHLSVVLHKLADKGNTVLIIEHNLDLIKVADHLIDIGPEGGGAGGTIVAQGTPEQVAK
SGKGHTSRFLAEELKLSKYAEA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaatcaaccgccgcttctgtttcttccctcgctgcccccaaaccggccgcg
gctcccaaacctgcccgttcggccaaggcggcgaaacccacggcaactacggctgagctg
aaagccaaacccaccaaggcccccaaagaagctaaagcgctcaagtcagccgttgccgac
aatgccactgagcatagcaccgccgccgtgcaggccgtgccgcgccaggagcaggtgagc
gaggccgtgctggaaaaccaggcccgcatccagggccagctgctgggccccgccgaccta
gaagcgccctatattgaagtgtacggagcccgggagcacaatctcaagaacgtatccgtg
aagattccgcgcgggaggctggtggtgtttaccggcatttcgggctcgggcaagtcgtcg
ttggcgtttgataccatctacgccgagggccagcgccgctacatggaaacgttttcggcc
tacgcccgcagcttcatgggcgggctggagcggcccgacgtggacaagattgagggtctg
tcgccggttatcagcatcgagcagaaaaccacttcgcgcaacccccgctccaccgtcggc
accatcaccgagatttatgacttcctgcgcctgctctacgcccgcaccgccgaggcgttc
agctacgccacgggccagaagatgatccggcagagcgacgaccagatcatcaactacatc
ctgaaagagtacgacggccgcaaaatggtggtgctggctcccgtggtgaagggccgcaaa
ggccattaccgcgagctgttccagcaggtggctaagctgggcttcaccaaagtgcgcgtc
gatggcgagctgcttgacctcacgcccaagatgcaggtggaccgctacaaaatccacgac
atcgaaatcgtcatcgaccgactggtggtgaaggaggaagaccggttccgcctctccggc
tcggtgcagaacgccctcacccaaggcaaaggcaccatgctggtgctcgacgccgacaag
aagaaggacaacacccagttcttctcccgcttcctgatggacccggccaccggcattgcc
tatgatgatccggcccccaacacgttcagcttcaactcgccctacggcgcctgccccacc
tgcaacggcctgggcgaggtgcaggaaatcaccgaagaaacggtgatgcccgacaagaag
ctcagcatcagtcgcggcggtattgcgcccttgggcgagtaccgggacatctggattttc
cagcagctgggcctcatcctgaaaaagcacaaagccagcctcagcacgcccattgaaaag
ctgcccgccgacttggtggagcggctgctctatggcgtgcccgaggacgaggacgccgac
cccaaaaaggccaactataccgagccgttcgagggcatcatcccgtttttgcgccgccag
atggagtcggaatccgacaacatccgggagtggattcagcagtatacccaggccaaggag
tgccccgagtgtcacggctaccgcctcaaaaaggagtcgttgcacttcaagattgccgac
caccacatcgggcagctttcggtaatggacctgagcgagctggccgcgtggtttgagggc
ttggaagaccgcctctcggagcgccagaacctgattgcgcgggagctgctgaaggaaatc
cgcaagcgtatcggcttcctgctggaagtgggcctcgactacctgaacctgcaccgctcg
gtgcgcacgctctcgggcggcgagtcgcagcgcatccgcctggccacccagatcgggacc
cagctggtgggcgtgctctacatcatggacgaacccagcatcggcctgcaccagcgcgac
aacgagcggctcatcaaggccctgcagcatctgcgcgacctgggcaactcggtgattgtg
gtggagcacgacaaggacatgatcctgcacgccgaccacgtgctcgacatcggccccggc
gccggcatccacggcggccagattgtggcccagggcacgccttccgaaatcttcaccagc
ggctcgctcacctcgcagtacctcagcgggcaaaagcacatcgagttgcgcaagaaaaag
cgggccggtgaaggcaatgagctggtgctgcgcggggccaaaggccacaacctgaaaaac
gtaacggccaagtttccattgggcaagctcattgccgtgacgggcgtgtcgggctccggc
aaatcctcgctcatccacgacacgctgtaccccatcctcaaccagcacttcttcaacgcc
aagcgcgagccgctggcgtatgataagattgaggggctggagttcattgataaggtgatt
gaggttgaccagtcgccgattgggcgcacgccgcgctccaacccggccacctacaccggc
gtgttcaccgaaatccgccagctgtttgccaacctgcctgaggccaaaatccggggctac
gggccgggccgcttctccttcaacgtgaagggcgggcgctgcgaaacctgtgagggggct
ggcatgcgcaccatcgaaatgaacttcctgcccgacgtgcacgtgccctgcgaaacctgc
aaaggccgccgctacaaccgcgaaacgctggaagtgcgcttcaaaggcaagagcatcacc
gacgtgctggacatgaccgtggaaaaggccgtggagttcttcgagttccagccccgcatc
ctgcgcaagattcagacgttgaacgaagtaggactgggctaccttaccttgggccagcag
gccaccacgctgtcgggcggcgaggcccagcgcgtgaagctggccaccgagctcagcaaa
aaggacaccggcaagacgttctacatcctcgacgagcccaccaccggcctgcacttcgag
gacatcaaccacctttccgtagtcctgcacaagctcgctgataaaggcaacaccgtcctc
atcatcgagcacaacctcgacctgatcaaggtagctgaccatctcatcgacatcgggccg
gaaggcggcggggcgggcggcaccattgtggcccagggcacgcccgagcaggtggccaag
tccggcaaaggccacaccagccgcttcctggctgaggagctgaagctcagcaagtacgcc
gaggcgtag
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