KEGG   Hymenobacter yonginensis: O9Z63_18665
Entry
O9Z63_18665       CDS       T08743                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hyk  Hymenobacter yonginensis
Pathway
hyk03030  DNA replication
hyk03410  Base excision repair
hyk03420  Nucleotide excision repair
hyk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hyk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    O9Z63_18665 (polA)
   03410 Base excision repair
    O9Z63_18665 (polA)
   03420 Nucleotide excision repair
    O9Z63_18665 (polA)
   03440 Homologous recombination
    O9Z63_18665 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hyk03032]
    O9Z63_18665 (polA)
   03400 DNA repair and recombination proteins [BR:hyk03400]
    O9Z63_18665 (polA)
Enzymes [BR:hyk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     O9Z63_18665 (polA)
DNA replication proteins [BR:hyk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     O9Z63_18665 (polA)
DNA repair and recombination proteins [BR:hyk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     O9Z63_18665 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     O9Z63_18665 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_2 DNA_polI_exo1 HHH_5 RNase_H_2
Other DBs
NCBI-ProteinID: WBO84377
LinkDB
Position
complement(4335178..4338060)
AA seq 960 aa
MSDAPAAQPHKLFLLDAFALIYRAHFAFSKNPRVNSKGLNTGAILGFTNTLVEVLQKEKP
THIGVAFDAAKKTFRHEQYAEYKAQRQAMPEDIGLAIPYIKQIIKAFHIPILMVEGYEAD
DVIGTLARRAEAQGFGEVYMMTPDKDYCQLVTDCIKIYRPAFMGNAAEILDVAHVLQRFE
VERPEQVIDILGLQGDASDNIPGIPGIGEKTAKTLIQKYGSVENLIANVDQLKGKQQENV
RNFAEQGLMSKELATIHLDVPIEFEADKLVLDQPDAEQLRQLFDELEFRQLAARVLGGGS
PAGVSAAPASRGARRPKTAEGQGSLFGSSVDAAVAIGAEEGETGEFGAPAGPRRTLQDVP
HQYHLMDTPELRASLLAFLLQQTEVSFDTETTGLDIMTARLVGLSFCWLPGEAYYVPVPT
DDHAATQALVDEFCPFFEAQHILKIGQNIKYDLTILKHYHVQVSGPLFDTMLAHYLLEPD
MRHGMDVLAETYLHYTPVPITDLIGPKGKNQKTMADLPPAEVSDYACEDADVTLQLKHVF
EPMLKEVGLLDLLNEVENPLVPVLADIEYEGVKIDSSAMGEYSAELQGYIVDLEKQIFAE
AGQEFNIGSPKQLGEVLFDKMDIGKGKIKKTKTGQYATGEEILSQLAADNPIAALILEYR
QLTKLRSTYVEALPQLVNVADGRVHTSFNQAVTATGRLSSTNPNLQNIPIRTEKGREIRK
AFVPRDAGHVLLAADYSQVELRIMADFSGDQTMIEAFRQGLDIHTSTASKVFKVPLNEVD
GEMRRKAKTVNFGIIYGISAFGLAQRIGIGRKEATDIIETYFQEFPRVKQFMDESINQAR
ELEYATTLLGRRRYLRDINSRNATLRGYTERNAINAPIQGTAADIIKKAMINIHEWLRQE
KLGTRMILQVHDELVFDAVQEEVAYITPKIKELMATALLLPHGVPLEVEVGTGQNWLQAH
NT seq 2883 nt   +upstreamnt  +downstreamnt
atgtccgacgcccccgctgcccagccccacaaacttttcctgctcgacgccttcgccctg
atttaccgcgcccactttgccttcagcaaaaacccgcgcgtgaactccaagggcctcaac
accggagccatcctgggcttcaccaacacgctggtggaggtgctgcagaaggagaagccc
acccacattggggtggcgtttgatgccgccaaaaagaccttccgccacgagcaatacgcc
gagtacaaggcccagcgccaggccatgcccgaggatatcggcctagccattccctacatc
aagcagatcatcaaagccttccacatccccattctgatggtggaaggctacgaggccgac
gacgtgattggcacgttggcccgccgggccgaggcccagggctttggcgaggtgtacatg
atgacgcccgacaaggactattgccaactcgtgacggactgcatcaaaatctaccggccg
gccttcatgggcaacgccgccgaaatcctagacgtggcgcacgtgctgcagcgcttcgag
gtggagcggccggagcaggtgattgatattctggggttgcagggcgacgcttccgacaac
attccaggcattccgggtatcggcgagaaaacggccaagaccctgattcagaagtacggt
tccgtcgaaaacctgattgccaacgtggaccagctcaagggcaagcagcaggaaaacgtg
cgcaacttcgccgagcagggcctgatgagcaaggagttggccaccatccacctggacgtg
cccattgagtttgaggccgacaagctggtgctggaccagcctgatgctgaacagttgcgc
cagctgttcgacgagctggaattccgtcagctggccgcccgcgtgctgggcggcggcagc
cccgccggcgtaagtgccgccccggcctcgcgcggagcgcggcggcccaaaaccgccgaa
ggccagggcagcctattcggctcgtcggtggatgcggcggtggctattggcgctgaggaa
ggcgaaacgggcgagtttggcgcgccggccgggccgcgccgcaccctgcaggacgtaccg
caccagtaccacctgatggacacgcccgagctgcgcgcttctttgctggcgtttctgctg
cagcaaaccgaggtcagcttcgacaccgaaactaccgggctggatattatgacggcgcga
ctggtgggcctctccttctgctggctgcccggcgaggcctattacgtgcccgtgcccacc
gacgaccacgccgccacccaggccctggtggacgagttctgcccgttcttcgaggctcag
cacatcctcaaaatcggccagaacatcaagtacgacctcaccattctcaagcactaccac
gtgcaggtgagcgggccgctgttcgacactatgctggcccactacctgctggagcccgac
atgcgccacggcatggacgtgctggccgaaacctacctgcactatacgccggtgcccatc
accgacctcatcggccccaagggtaaaaaccagaaaactatggccgacttgcccccggcc
gaggtatcggactacgcctgcgaggatgccgacgtgacgctgcagctcaagcacgtattc
gagcccatgctcaaggaagtgggcctgctggatttgctcaatgaggtggaaaacccactg
gtgccggtactggccgatatcgagtacgagggcgtgaaaatcgactcctcggccatgggc
gagtactcggccgagctgcagggctacatcgtggacctcgaaaagcagattttcgcggaa
gccggccaggaattcaacattggctcgccgaagcagctgggtgaggtgctgtttgataag
atggacattggcaaaggcaaaatcaagaaaaccaagaccggccagtacgccaccggcgag
gaaatcctgagccagctggccgccgacaaccccattgctgccctcattctggagtaccgc
cagctcacgaagctgcgcagcacctacgtggaggccctgccccagctagtgaacgtagcc
gacggccgcgtgcataccagcttcaaccaggccgtgacggccaccggccgcctcagcagc
accaaccccaacctacagaacattcctatccgcaccgagaaaggccgggaaatccgcaag
gccttcgtaccccgcgacgccggccacgtgctgctggccgccgactactcgcaggtggaa
ctgcgcatcatggccgatttttcgggcgaccagaccatgattgaagccttccgccagggc
ctcgacattcacaccagcacggccagcaaggtgttcaaagtgccgctgaatgaagtggac
ggcgagatgcgccgcaaggccaaaaccgtcaacttcggcatcatctacggcatttcggcc
ttcgggctggcccagcgcatcggcatcggccgcaaggaggctaccgacatcatcgagacg
tacttccaggagtttccgcgggtgaagcagttcatggacgagagcatcaaccaggcccgg
gagctggagtacgccaccaccctgctgggccgccgccgctacctgcgcgacatcaactcg
cgcaacgccaccctgcgcggctacaccgagcgcaacgccatcaacgcccccatccaaggc
accgcggccgacatcatcaagaaggccatgatcaatatccacgagtggttgcgccaggaa
aagctcggcacccgcatgattctgcaggtgcacgacgaactagtgttcgacgccgtgcag
gaggaagtagcctacatcacgcccaaaatcaaggagctgatggccaccgccctgctcctg
ccccacggcgtgccgctggaagtggaagtaggcactggccagaactggctgcaggcgcac
taa

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