Hydrogenophaga crassostreae: LPB072_03835
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Entry
LPB072_03835 CDS
T04505
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPB072_03835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyl03021
]
LPB072_03835
03400 DNA repair and recombination proteins [BR:
hyl03400
]
LPB072_03835
Enzymes [BR:
hyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LPB072_03835
Transcription machinery [BR:
hyl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LPB072_03835
DNA repair and recombination proteins [BR:
hyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LPB072_03835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AOW12112
UniProt:
A0A163CBR3
LinkDB
All DBs
Position
794296..795282
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AA seq
328 aa
AA seq
DB search
MLNNLLKPKTINVEQVSTNRAKVTLEPFERGYGHTLGNALRRVLLSSMVGHAPTEVTIAG
VVHEYSSIDGVQEDVVNMLLNLKGVVFKLHNRDEVTLSLRKDGEGIVTAADIQTPHDVEI
VNPEHVIATLSGGAKLDMQIKVEKGRGYVPGSLRRNDDQSRSLGRIVLDASFSPIKRVSY
TVESARVEQRTDLDKLVLEIETNGSIGPEEAVRASAKILVEQLAVFAQLEGLELSAFDQP
AQRSSQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLASRGLTLGMKLENWPPAGLDKH
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaatctgctcaagcccaaaacaatcaatgtcgaacaagtttcgacgaaccgc
gccaaggtcacgctcgagcctttcgaacgtggctacgggcataccttgggcaatgccctg
cgtcgggtgctgctttcttccatggtcggccatgcgccaaccgaagtgacgattgccggg
gttgtacatgagtactcctctattgacggtgtccaggaagacgtcgtcaacatgctgctc
aacctcaaaggtgtggtgttcaaactccacaaccgcgatgaagtgacgcttagcctgcgc
aaggatggcgaagggatcgtgacggcagctgacattcaaacgccccacgatgttgaaatc
gtcaatccagaacacgtgattgccacgctctccggcggtgccaagttggatatgcagatc
aaggtcgaaaagggtcgcggctatgtgcccggtagcctgcgtcgcaatgacgaccagtcg
cgctcgcttggacgcatcgtgttggacgcttctttttctccgatcaagcgcgtcagctac
acggttgaaagtgcacgcgtcgagcagcgcaccgatctggacaagcttgttctggaaatc
gaaaccaatggttcgataggcccggaagaagcggttcgcgcttcggccaagatcctcgtt
gagcagttggccgtgttcgcgcagttggaaggtctggagctctccgcttttgatcagccg
gctcaacgcagttcacaacagttcgatccgatcttgttgcgtcctgtcgacgagcttgag
ttgacggttcgttctgccaactgcttgaaggcggagaacatctactacatcggtgatctg
atccaacgcaccgaaaacgagttgctcaagaccccgaatctgggtcgcaagtcactcaac
gagatcaaggaagtgcttgcttcgcgcggcctgaccttgggtatgaagcttgaaaactgg
ccaccagctggcctggacaagcactga
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