Hydrogenophaga crassostreae: LPB072_04370
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Entry
LPB072_04370 CDS
T04505
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LPB072_04370
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
HHH_6
DUF460
Motif
Other DBs
NCBI-ProteinID:
AOW12198
UniProt:
A0A167HGA0
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Position
916464..918851
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AA seq
795 aa
AA seq
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MQKIIAQIAQEIKVQVQQVIAAVELLDGGATVPFIARYRKEATNGLDDIQLRELEYRLTY
LRELEDRRASVLKNIDEQGKLTDTLRAAIAAAPTKQELEDLYLPFKQKRRTKGQIAREFG
IEPLADKLWADPTLDPATEAEAFTRPAEVLDDGKPGPDFSTVPAVLDGVRDLLSERWAED
AGLLQNLREWLWNEGLFKSTLVAGKDENHPDVAKFRDYFEYDEPISRVPSHRALAVFRGR
TLEILDAKLVVPEAEPTLTATGRPAPVVSLAEGRIALHLGWSHKARAADDLLRKCVAWTW
RVKLSLSSERDLFARLRESAEGVAIKVFADNLRDLLLAAPAGPKAVMGLDPGIRTGVKVA
VVDVTGKLVDTATVFPHEPRRDWDGALHTLALLARKHGVSLIAIGNGTASRETDKLAADL
IKMLEKAGQTGVQKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAELV
KIDPKSIGVGQYQHDVNQSELARTLETVVEDCVNGVGVDLNTASVPLLSRVSGLSGSVAK
AVVHWRETHGAFKSRKQLMDVAGLGAKTFEQSAGFLRIRGGENPLDMTGVHPETYSVVEQ
IIEKTGQPVAALMGRADMLKALRPELFANEKFGVITVKDILVELEKPGRDPRPDFQVARF
NDGVDDISDLREGMILEGTVSNVAQFGAFIDLGVHQDGLVHVSQLANKFVNDAREIVKTG
DIVKVKVMEVDVARKRIGLSMKLDATAPRREAGAARDNRFEPARQGHGGGRSGGQAPQAA
SAMASAFAKLQQPKS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcatcgcgcaaatcgcgcaagaaatcaaagttcaggttcaacaggtcatc
gcagcggtggagctgctggatggcggtgccaccgtgccgttcattgcgcgttaccgcaaa
gaggccaccaatggcctggatgacattcagttgcgcgagctggaataccggttgacctat
ttgcgagagctggaagaccgccgtgcttcggtgctcaagaacatcgatgaacaaggcaag
ctcaccgataccctgcgggcagccatcgccgctgcgcccaccaaacaggaactcgaagac
ctgtatctgcccttcaagcaaaagcgccgcaccaagggtcagatcgcccgcgaatttggc
atcgaacccttggccgacaaattgtgggccgatcccacgctggacccggccaccgaggcg
gaggcttttacccgaccggccgaagtgctcgatgacggcaagccaggccccgatttctcg
accgtgccggcggtgctcgatggcgtgcgtgatctgctgagtgagcgctgggccgaagac
gcggggctgttacagaacctgcgtgaatggttgtggaacgagggcctgttcaagagcacg
ctggtggcaggcaaagatgaaaaccaccccgatgtggccaagttccgcgactactttgaa
tacgacgagccgatcagccgcgtgccgtcgcaccgcgctctggcggtgtttcgcggccgc
accctggagattctcgacgccaagctcgtggtaccggaagccgagcccacattgaccgca
actgggcgccctgcgccagtggtttcgctggcagaaggccgcattgccctgcatttgggc
tggagccacaaggcccgcgcggcagatgatctgttgcggaaatgtgtggcctggacctgg
cgggtgaaactgagcctgtcgagcgagcgcgacttgtttgcgcgtttgcgtgaaagcgcc
gaaggcgtcgcgatcaaggtgtttgccgacaacctgcgggatctgttgctggccgctccg
gccggacccaaggcggtgatgggactcgatccgggcatccggaccggggtcaaggtggcg
gtggtggatgtcacgggcaagctggtcgacacagccacggttttcccccacgaaccccgc
cgcgactgggatggcgccttgcatacgctggcgctgctggcccgcaagcatggcgtgagc
ctgattgcgatcggcaacggcacggcgagccgcgaaaccgacaagctcgccgctgacctg
atcaagatgcttgagaaggccggacaaacaggcgttcagaaggtggtggtgagcgaggcc
ggcgcatcggtgtattcggccagcgaattcgcttcccaggaaatgcccgatgtggatgtg
agcctgcgcggcgcggccagtattgcgcggcggctgcaagacccgttggccgagctggtg
aagatcgaccccaagagcattggtgtgggccagtatcagcacgatgtgaaccagagtgag
ttggcacgcacgctggagaccgtggtggaggactgcgtgaacggcgtgggagtggacctg
aatacggccagcgtgccgttgctgtcccgggtgtcgggtttgtcgggcagcgtggcgaaa
gccgtggtgcactggcgggaaacccacggggctttcaaaagccgcaagcaactgatggat
gtggctgggctgggcgccaaaacctttgaacaaagcgcaggcttcctgcgcatccgcggc
ggcgagaacccgctggacatgacgggggtgcatcccgagacctattcggtggtcgagcag
atcatcgaaaaaacggggcagcctgtggccgcactcatgggccgtgcagacatgttgaag
gcgctgcgtcccgagttgtttgccaatgagaagtttggcgtgatcacggtgaaagacatt
ctggtcgagctggaaaagccgggccgcgatccgcgcccggactttcaggtggcgcgcttc
aacgacggggtcgatgacatcagcgacctgcgcgaaggcatgattctggaaggcacggtg
agcaacgtggcccagtttggcgccttcatcgatctgggggtgcaccaggatggtctggtg
catgtgagccagttggccaacaagtttgtcaatgatgcccgtgagatcgtgaaaacgggt
gacatcgtgaaggtcaaggtgatggaggtggatgtggcgcgcaagcgcattgggctgtcc
atgaagctggatgccacggcgccaaggcgtgaagccggggcggcccgcgacaaccggttc
gagcctgcccgtcagggccacggcggtgggcgatctggcgggcaagcgcctcaagcggct
tcggccatggcgtcggcatttgccaagctgcagcaacccaaatcctga
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