Hydrogenophaga crassostreae: LPB072_05015
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Entry
LPB072_05015 CDS
T04505
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB072_05015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyl03019
]
LPB072_05015
Messenger RNA biogenesis [BR:
hyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LPB072_05015
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Ortholog
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GFIT
Motif
Pfam:
NUDIX
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AOW12309
UniProt:
A0A162SWY0
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All DBs
Position
complement(1038997..1039644)
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AA seq
215 aa
AA seq
DB search
MLDREGFRPNVGIILLNQKNQVFWGKRIRSHSWQFPQGGIDRGETPEQAMFRELHEEVGL
MPEHVDIVARTRDWLRYEVPDRFIRRDARGHYKGQKQIWYLLRLVAHDWNLNLRATSHPE
FDAWRWHDYWVPLDVVVEFKRGVYEMALTELARYLPRGDYRNRFLRGNVARHRVACEAAD
FERPIIQGGPPGMELPPGASFDPDPQSDLRASEGK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacagagaaggcttcaggcccaatgtcggcatcattctgctcaaccagaaaaac
caggtattttggggcaaacgcatccgttcccattcctggcaattcccgcagggtggcatc
gacagaggtgaaacgccggaacaggccatgttccgcgagttgcacgaagaagtgggcttg
atgcccgaacacgtggacatcgtcgctcgaacgcgcgattggcttcgctatgaagtgccc
gaccgtttcattcggcgcgacgcacgcggccactacaaaggccagaaacaaatctggtac
ctgttgcgcttggtcgcacatgactggaatctgaatctgcgtgccaccagtcacccggaa
tttgacgcttggcgatggcatgactactgggtgccgctggacgtggtggtggagttcaaa
cgtggcgtctatgaaatggctctgaccgagttggcccgctaccttccacgcggagactac
cgcaaccgctttttgcgtggcaacgtcgctcgccacagggtcgcttgcgaggccgcggat
tttgaacggcccatcattcaaggcggcccaccgggtatggaactgccacctggcgccagc
ttcgatcctgaccctcaaagtgatttgcgagccagcgaaggcaaatag
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