Hydrogenophaga crassostreae: LPB072_05125
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Entry
LPB072_05125 CDS
T04505
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LPB072_05125
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hyl01007
]
LPB072_05125
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyl03016
]
LPB072_05125
03029 Mitochondrial biogenesis [BR:
hyl03029
]
LPB072_05125
Enzymes [BR:
hyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LPB072_05125
Amino acid related enzymes [BR:
hyl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LPB072_05125
Transfer RNA biogenesis [BR:
hyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LPB072_05125
Prokaryotic type
Other AARSs
LPB072_05125
Mitochondrial biogenesis [BR:
hyl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LPB072_05125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
tRNA-synt_2d
Thioredoxin_3
Motif
Other DBs
NCBI-ProteinID:
AOW12330
UniProt:
A0A162SX12
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All DBs
Position
1062636..1064438
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AA seq
600 aa
AA seq
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MAMRSHYCGLVTEALMGQTVQLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFS
TAEDVRNEFCVQVTGLVRARPAGTTNDKLKSGQIEILCHELTVLNASVTPAFQIDDENLS
ETTRLTHRVLDLRRPYMQNNLMLRYRVSMEVRKFLDANGFIDIETPMLTKSTPEGARDYL
VPSRVHDGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETS
FLDEQEIRDMFQGMIKTVFQNTMNVDLGDFPVMAYSEAMHRFGSDKPDLRVKLEFTELTD
VMADVDFKVFSTPATMKNGRVVALCVRGGAEISRSEIDAYTEFVKIYGAKGLAWIKVNEV
AKGKDGLQSPIVKNLHDKAIAEVLKRTNAQDGDIIFFGADKEKIVNDAIGALRLKIGHSD
LGKKNGLFENRWAPMWVVDFPMFEHDEEADRWTAVHHPFTAPKDGHEDWMVSAPEKCIAK
GYDMVLNGWEIGGGSVRIHTAAVQQKVFDALKITPEEAQEKFGFLLDALQYGAPPHGGLA
FGLDRIITLMTGAESIRDVIAFPKTQRAQCLLTQAPSVVDEKQLRELHIRLRNLDLAKTA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcgctcccactattgcggtctggtgaccgaagccctgatgggccaaaccgtt
caactttgcggctgggtgaaccgccggcgcgaccatggcggcgttattttcattgatctg
cgcgatcgcgaaggttatgtgcaagtggtgtgtgaccccgaccgcgccgagatgttctcg
acggccgaagatgtgcgcaacgagttctgcgtgcaagtgaccgggttggtgcgtgcgcgt
cctgccgggacaaccaacgacaagctgaaaagcggtcagattgaaattttgtgccatgag
ctgacagtgctcaatgcgtcggtcacaccggctttccagatcgacgacgaaaacctgtcg
gagaccacgcgcctgacccaccgtgtgctcgaccttcgccgtccttacatgcaaaacaac
ctgatgctgcgctaccgcgtgtcgatggaagtgcgcaagtttttggatgccaatggtttc
attgacattgaaacaccgatgctgaccaagagcacgcctgaaggggctcgcgactacctg
gtacccagccgtgtgcacgacggtcatttctttgcactgccgcaatcgccccagctgttc
aagcagttgttgatggtggctggtttcgatcgctactaccagatcaccaaatgcttccgc
gacgaagatcttcgcgctgatcgccagcccgagttcacccagatcgatattgagacatcg
ttcctggacgagcaagagattcgcgacatgttccagggcatgatcaaaaccgtgtttcag
aacaccatgaacgtggacctgggcgatttccccgtcatggcctacagcgaagccatgcac
cgctttggctccgacaagcccgatctgcgcgtcaagctggagttcactgaactcaccgat
gtgatggccgatgtggatttcaaggtcttcagcacccccgccaccatgaaaaatggccgt
gtggttgctctgtgtgtgcgcggcggtgctgaaatcagccgcagcgagatcgatgcctat
accgagtttgtcaagatctacggcgccaaaggcttggcctggatcaaggtcaatgaagtg
gccaaaggcaaagacggtttgcagtcgcccattgtcaaaaacctgcacgacaaggccatt
gccgaagtgttgaagcgcaccaatgcccaagacggtgacatcattttctttggcgccgac
aaagagaaaatcgtcaatgacgccatcggtgctcttcgcttgaagattggtcacagcgat
ctgggcaagaagaatggcctgtttgaaaaccgctgggcaccgatgtgggtggtggacttc
ccgatgtttgagcatgacgaagaagccgatcgctggactgctgtgcaccaccctttcacc
gcaccgaaagatggtcacgaagactggatggtttccgcgcctgaaaagtgcattgccaaa
ggctacgacatggtcttgaatggctgggaaatcgggggtgggtcggtgcgtatccacacg
gcggcggtgcagcagaaggtgtttgatgcgctcaagatcacgcctgaagaagcccaggaa
aaatttggtttcctgctcgatgctttgcagtatggagcaccaccccatggtggtttggcg
ttcggtcttgaccgcatcatcacgctgatgaccggagcggagtcaatccgggacgtgatt
gccttccccaaaacccagcgcgcccagtgcttgctcacgcaagcgccctcggtggtggac
gagaagcagttgcgcgagttgcatatccgtttgcgcaacctggacctggccaagacagct
tga
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