Hydrogenophaga crassostreae: LPB072_05510
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Entry
LPB072_05510 CDS
T04505
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB072_05510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyl03000
]
LPB072_05510
03400 DNA repair and recombination proteins [BR:
hyl03400
]
LPB072_05510
Enzymes [BR:
hyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LPB072_05510
Transcription factors [BR:
hyl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LPB072_05510
DNA repair and recombination proteins [BR:
hyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPB072_05510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HHH
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AOW12391
UniProt:
A0A167IAT4
LinkDB
All DBs
Position
complement(1161986..1163527)
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AA seq
513 aa
AA seq
DB search
MPSQNPHIDADACYRALCSHDARFDGQFFTAVTSTGIYCRPVCRVRTPRRENCRFFEHAA
QAEQAGFRPCLRCRPELAPLDRHWSTEDAGTILAQQATRWLDDPHVWAKGDESNRTVARL
ATRLGVSDRHLRRIFDSHLGLSPLQYLLTRKLLTAKQLLTDTALPITQVAQASGFSSQRR
FNAAFLAHYRLKPTQMRRLPPQTEGRADKPVALAWRPPLDSAALMRFFAQRQIGGVEWVE
LGDTPCLRRTLRIDAGGITHRGWFSVRLEPQHHRAKLHVSDSLQAVLPAVTWRVRAMLDL
DADPTAINAVLNKPFPEGNGLRVPGCVDGFELATRAILGQQITVAAARTLAQRLVELLGE
PVTTPFAELQCLFPTPEAIAAASPDVLGAIGIVRQRQKALQALAESITTGAVDLSPHANP
KTTIEALQALPGIGPWTAQYIAMRALRWPDAWLVGDVALTKALGLPDHRGREAQREAERL
SQAWRPWRSYAVIRAWAAPAKPGPSTNPSEVTP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgcaaaacccccacattgacgcagacgcctgctaccgcgccctgtgctcccac
gatgcgcggttcgatgggcaattctttaccgccgtgacgtcaacaggcatctattgccgc
ccggtttgcagggttcgcacacccaggcgtgaaaactgccgcttcttcgaacatgccgcg
caagccgagcaagccggctttcggccatgcctgcgctgccgcccggagctggccccactg
gatcgtcattggtcgaccgaagacgcgggaaccatccttgcccagcaagccacccgctgg
ctcgacgacccccatgtctgggccaaaggggacgagtccaaccgcaccgttgcccgactt
gcgacccggctgggtgtcagcgaccgccatctgcgccgcatcttcgactcgcacctcggc
ctttcccctttgcaatacctgctgacccgcaagctgctgactgccaaacaactgctgacc
gatacagccctgccgatcacccaagtggcacaggccagtggcttttccagccaacggcgt
ttcaatgcagcgtttttggcccactaccggctcaaaccgacccagatgcggcggttgcct
cctcaaaccgaaggtcgtgccgacaaacccgtcgcactcgcctggcgcccacccctcgat
agcgctgccctcatgcgcttcttcgcacagcgacaaatcggcggcgtcgaatgggtcgaa
ttgggcgataccccttgcctgaggcgtacccttcgcatcgacgccggcggcatcactcat
cgtggctggttctcggtgcgtcttgagccacaacaccaccgtgccaagcttcatgtcagc
gacagcctgcaggccgttctacctgctgtgacctggcgtgtgcgagccatgctggatctg
gatgccgacccaacggccatcaacgcggtgctgaacaagccgtttcctgaaggcaatggg
ctgcgcgtaccgggctgcgtcgatggttttgaactcgcgacgcgcgccattctcggccag
cagatcaccgtcgctgccgcgcgcacgctggcgcagcggctggtcgaactgctgggtgag
cccgtcacaaccccgttcgccgaactccagtgcctgtttcccacgcccgaggccatcgct
gcggcctctcccgatgtgctcggtgcgatcggcatcgttaggcagcggcaaaaggccttg
caggcattggccgaatcgatcaccacaggcgctgttgacctgagtccccacgccaatccc
aaaaccacaatcgaagccttgcaagctttgccaggcataggtccatggaccgcgcagtac
atcgcgatgcgcgccttgcgctggcccgacgcctggctggtgggcgatgtggcgctgacc
aaggccctcgggctgcccgaccaccgcggtcgcgaggcacaacgcgaggcggagcgcctg
tctcaagcctggcgtccctggcgcagctatgccgtgatccgtgcctgggctgcgcccgca
aaaccgggcccatccaccaacccttcagaggtcacgccatga
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