Hydrogenophaga crassostreae: LPB072_05980
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Entry
LPB072_05980 CDS
T04505
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LPB072_05980
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hyl01007
]
LPB072_05980
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyl03016
]
LPB072_05980
Enzymes [BR:
hyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LPB072_05980
Amino acid related enzymes [BR:
hyl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LPB072_05980
Transfer RNA biogenesis [BR:
hyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LPB072_05980
Prokaryotic type
LPB072_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TMF_TATA_bd
DUF7310
DUF7491
UPF0449
CENP-H
DASH_Dad2
DivIC
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
AOW12469
UniProt:
A0A163C9K1
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All DBs
Position
1272592..1273902
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AA seq
436 aa
AA seq
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MLDINTLRKDLDATIARLETRKKPQAFLNVDTFKDLESERKTLQTRTEELQSQRNTLSKQ
IGQLKAKGESVEPVMVAVGEIKVELEASAARLEVIQAELQTLLLAVPNVPHESVPVGADE
EGNVEVRRWGVVREFDFKVRDHVDIGAPLGLDFDTGVKLTGSRFTFMRGPIARLHRALAQ
FMLDVQTQEHGYTECYTPYIVNAETLRGTGQLPKFEGDLFAAKKGGQDGEEAPDLQALYL
IPTSEVTLTNTVRDTVVAESELPIRLTAHTPCFRSEAGSAGRDTRGLIRQHQFDKVEMVQ
IVHPEKSYEALEAMTGHAEAVLQKLGLPYRVMSLCTGDMGFGATKTYDLEVWVPAQAVYR
EISSVSNCEAFQARRLQARFKNAQGKNELVHTLNGSGLAVGRALVAVLENCQNADGSVTV
PEVLRPYMGGLEKLVP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatatcaataccctccgcaaagacctcgacgccaccatcgcccggctcgaaacc
cgcaaaaaaccccaggcgttcttgaacgtggatacgttcaaggatctggagtcggaacgc
aagacgctgcaaacccgcaccgaagagctgcaaagccagcgcaacacgctgtccaaacag
atcggtcaactcaaagccaagggcgagagcgtggagccggtgatggttgctgtgggtgag
atcaaggtcgagctggaggcttcggccgcacgcctggaagtgatccaggccgagttgcag
acgctgctgttggcggtgccgaatgtgccgcacgagagcgttccagtgggcgcagacgaa
gagggcaatgtggaagtgcgccgatggggtgtggtgcgtgaatttgattttaaggtgcgc
gaccacgtagacattggtgcgccactggggctggactttgacaccggcgtgaaactcacc
ggttcgcgtttcaccttcatgcgcggtcccatcgcccgattgcaccgtgcgctggcccag
ttcatgctcgatgtgcagacgcaagaacacggctacaccgagtgctacacgccttacatc
gtcaacgccgaaaccctgcgcggtaccggccagctgcccaaattcgagggtgatctgttt
gccgcgaagaagggcgggcaggatggcgaagaggcgcccgatctgcaggcgctttacctg
atccccaccagcgaggtgacgctgaccaacacggtgcgcgacaccgtggtggccgagagc
gaactgccgatccgcctgaccgcccacacgccgtgctttcgatccgaggcgggcagcgcc
gggcgtgatacccgcggcctgattcgccagcatcagtttgacaaggtcgagatggtgcag
atcgtgcatcccgagaagagctacgaagcgctggaggccatgacgggtcacgccgaggcg
gtgttgcagaagctgggtctgccttaccgcgtgatgagcctgtgcaccggtgacatgggt
tttggcgctaccaagacctacgatctggaagtctgggtgcccgcccaggctgtgtaccgc
gagatcagttcggtatcgaactgcgaggcctttcaggcgcgccgcttgcaggcccgtttc
aagaatgcgcagggcaaaaacgagctggtgcacacgctcaacggatccggcctggccgtg
ggccgtgctttggtggcggtgctggagaattgccagaacgccgacggcagtgtgacagtg
cccgaggtgctgcgcccttacatgggcggtttggagaagctcgttccctaa
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