Hydrogenophaga crassostreae: LPB072_06970
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Entry
LPB072_06970 CDS
T04505
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00730
Thiamine metabolism
hyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LPB072_06970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyl03009
]
LPB072_06970
Enzymes [BR:
hyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
LPB072_06970
Ribosome biogenesis [BR:
hyl03009
]
Prokaryotic type
GTPases
LPB072_06970
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AAA_29
ABC_tran
ATP_bind_1
Roc
AAA_16
AAA_23
nSTAND3
nSTAND1
AAA_33
AAA_28
AAA_22
SRPRB
Arf
AAA_24
AAA_25
Septin
NACHT
RNA_helicase
AAA_7
AAA_18
AAA_5
RsgA_N
Hpr_kinase_C
P-loop_TraG
Rad17
AAA_19
ATPase_2
DUF87
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AOW12624
UniProt:
A0A162YVN8
LinkDB
All DBs
Position
complement(1495689..1496669)
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AA seq
326 aa
AA seq
DB search
MSRPAKPPAQPAAASHLKPGLVVASFGRHCLVESADGERRICHPRGKKSQVVVGDRVQWS
ASTDEGSVERVDERRNLFYRQDELRTKSFAANLDQILMLVAADPEFSERQLARALIAAEA
QNIPVIVVLNKSDLQPAFDRSWARLAPYRHMGVDVMPLRLKAATAASSEAGVEDLLQKLN
GKSTLILGPSGVGKSTLVNRLVPHAAALTGEISRALNSGKHTTTSTTWYWTDDSKQTALI
DSPGFQEFGLNHIEPMQLAQLMPDMRAALGNCRFYNCTHLHEPGCSVRDQVAKADEPPSD
TAPAIGANRYQIYGELFAELSDKRRY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgccctgccaagccaccggcccaacccgcggccgccagccacctgaagccggga
ttggtcgttgcctcttttggacgccattgtctggtggaaagcgccgacggcgaacgccgc
atctgccatccgcgcggtaagaaaagccaggtggtagtgggtgaccgcgtgcaatggagc
gcctccaccgatgagggcagtgtggagcgcgtggacgagcgccgcaacttgttttaccga
caggacgaactgcgcaccaaatcgttcgcggccaacctcgatcagattctgatgctggtt
gccgccgatcccgagttttccgaacgccaactcgcacgtgcactgattgctgccgaggca
caaaacattcctgtgatcgtggtgctcaacaagagcgatctacagcccgcattcgaccgt
tcgtgggcgcggttggcgccctaccgccacatgggtgtggacgtgatgccgttgcgcctg
aaggcagccaccgcggccagcagtgaagcaggtgttgaggatctgttgcagaagctgaac
ggaaaatccacgttgatactcggcccttctggcgtcggtaaaagcactttggtgaaccgg
ttggtgccccatgcagcggcgctcaccggcgaaatctcacgcgcactgaattccggtaaa
cacaccaccaccagcaccacctggtactggaccgatgactccaagcagaccgcgctgatc
gactcccctggtttccaggagtttggcttgaaccacatcgaacccatgcaactggcacag
ctcatgcccgacatgcgcgccgccttgggcaattgccgtttctacaactgcacccatttg
catgaacccggctgctcggtgcgcgatcaggtggccaaagccgacgagccccccagcgac
accgctccggcgatcggggccaaccgctaccaaatctacggtgagctgttcgccgagttg
tcggacaagcggcgctactga
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