Hydrogenophaga crassostreae: LPB072_07885
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Entry
LPB072_07885 CDS
T04505
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyl03021
]
LPB072_07885
Transcription machinery [BR:
hyl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LPB072_07885
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TFIIS_M
HTH_3
IF2_N
DUF733
Motif
Other DBs
NCBI-ProteinID:
AOW12774
UniProt:
A0A162YT09
LinkDB
All DBs
Position
complement(1693038..1693994)
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AA seq
318 aa
AA seq
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MSAALATNTFPAATLAVTNPWASRSLTLPSLGNLDAYISAVNRMPMLTLEEEQSAGRRLR
DDNDIDAAGQLVMSHLRLVVSIARQYLGYGLPHGDLIQEGNVGLMKAVKRFDPEQGVRLV
SYAMHWIKAEIHEYVLKNWRMVKMATTKAQRKLFFNLRSKKQGFRSEALDGDTHREAFSD
GEVEIVARELKVKPEEVREMETRMSGGDVVLDPSPSDDGEERFGPIAFLADATHEPSAMI
ESAQRDVLATEGIANAMGELDDRSRRIVTERWLKVNDDGSGGMTLHELAAEYGVSAERVR
QIEVAAMKKMRKALAEFA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcacttgccaccaacacgttccccgccgccaccttggccgtgacgaacccg
tgggcgagccgttcgctcaccttgccgtcgctgggcaacctcgacgcctatatttctgcg
gtcaaccgcatgcccatgctcacgctcgaagaagagcaaagcgcgggccgccgcctgcgt
gacgacaacgatatcgatgccgctggccagttggtgatgtcccacctgcgcctggtggtc
tcgattgcccgccagtacctgggttatggcctgccccacggcgacctgattcaggaaggc
aatgtgggcctgatgaaggccgtcaaacgtttcgacccggaacagggtgtgcgcctggtg
agctatgccatgcactggatcaaggccgagattcacgaatacgtgctgaagaactggcgc
atggtgaagatggccacgaccaaggcccagcgcaagctgtttttcaacctgcgctccaag
aagcagggtttccgctcggaggccttggacggcgacacccaccgcgaagcgttttcggat
ggcgaggtcgagatcgtcgcgcgcgagctgaaggtcaagccggaagaagtgcgcgagatg
gaaacccgcatgtcgggcggcgatgtggtgcttgatcccagccccagcgacgatggcgaa
gagcgcttcggcccgatcgccttcctggctgatgcaacccacgagccttcagcgatgatc
gagtcggctcagcgcgatgtgttggccactgaaggcatagccaacgccatgggcgaactg
gatgaccgctcgcgccgcatcgtgaccgagcgctggctcaaggtgaacgacgatggttcc
ggcggcatgacgctgcacgaacttgccgccgaatacggcgtgagcgccgaacgtgtgcgc
cagatcgaagtggccgcgatgaaaaagatgcgcaaggcactggctgaatttgcctga
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