Hydrogenophaga crassostreae: LPB072_08435
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Entry
LPB072_08435 CDS
T04505
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00250
Alanine, aspartate and glutamate metabolism
hyl00310
Lysine degradation
hyl00350
Tyrosine metabolism
hyl00650
Butanoate metabolism
hyl00760
Nicotinate and nicotinamide metabolism
hyl01100
Metabolic pathways
hyl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LPB072_08435 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LPB072_08435 (gabD)
00310 Lysine degradation
LPB072_08435 (gabD)
00350 Tyrosine metabolism
LPB072_08435 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
LPB072_08435 (gabD)
Enzymes [BR:
hyl01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
LPB072_08435 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
LPB072_08435 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
LPB072_08435 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AOW12865
UniProt:
A0A167GZ36
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Position
complement(1818950..1820428)
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AA seq
492 aa
AA seq
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MDMKTSPLALLKDPSLLKTDALINGEWVKGSSRFDVNDPATGLKLADVANLGPTEAEAAI
AAANAAWPAWRAQTAKQRSIILRKWFDLLMANQEDLGRIMTAEQGKPFAEAKGEVAYGAS
FVEWFAEEAKRINGETLPTFDNNRRLMVLKQPIGVCAAITPWNFPLAMITRKVAPALAAG
CTVIIKPAELTPLTALAAAELAIRAGIPAGVLNMLTADADQSIAVGKVICASDVVRHISF
TGSTEVGRILMAQSAPTVKKMSLELGGNAPFIIFNDADIDSAVEGAFASKYRNAGQTCVC
SNRFYVQSGVYDEFVEKFATKVKSAKVGNGFEDGVNQGPLIEEAALEKVQRHVDDAVSKG
ARIMAGGKRLPGQFFEPTLVADATNDMLCAKEETFGPFAPVFKFENEQEAIDAANDTEFG
LASYFYSRDVGRIFRVAEALEYGMVGINVGILATEHVPFGGVKQSGLGREGSHHGMDDYV
EIKYLCVGDILS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaagacatcccccctcgccttgctcaaagaccccagcctgctcaagaccgat
gccctgatcaatggcgaatgggtcaagggcagcagccgctttgatgtgaacgacccggcc
accggcctcaaactggccgacgtggccaacctcggcccgacagaagccgaggccgccatt
gctgctgccaacgccgcctggccagcctggcgcgcccagaccgccaagcagcgcagcatc
atcctgcgcaagtggtttgacctgctgatggccaaccaggaagacctcggccgcatcatg
accgccgagcaaggcaagccgtttgccgaagccaaaggtgaagtcgcctatggcgccagc
tttgtcgagtggttcgccgaagaggccaagcgcatcaatggcgaaacgctgcccaccttc
gacaacaaccgccgcctgatggtgctgaaacagcccatcggcgtttgcgccgccatcacg
ccctggaatttccccctggccatgatcacgcgcaaggtcgcgccagcgctggccgcgggc
tgcactgtcatcatcaagcccgccgagctcacgccgctgaccgcactggccgccgccgag
ctggccattcgcgccggtatccctgccggtgtgctgaacatgctcaccgctgatgccgac
cagtccattgccgtgggcaaggtcatttgcgccagcgatgtggtccgtcacatttccttc
acaggttccaccgaagtgggccgcatcctgatggcgcaaagcgcacccacggtcaagaaa
atgtcgctggagctgggcggcaacgcgcctttcatcatcttcaacgatgccgacatcgac
agcgcggtcgaaggcgcctttgccagcaaataccgcaacgccggccagacctgcgtctgc
tccaaccgcttttacgtgcaaagcggtgtgtacgatgaattcgtcgagaagttcgccacc
aaggtgaaatcggccaaggtcggtaacggttttgaagacggcgtgaaccagggccctctg
atcgaagaagcggctcttgaaaaggtgcagcgccatgtggacgatgccgtgtccaagggt
gcccgcatcatggctggcggcaagcgcctgcccggccagttcttcgaacccacactggtg
gccgacgccaccaacgacatgctctgcgccaaagaagaaaccttcggtccgttcgcgccg
gtgttcaagttcgaaaatgagcaagaagccatcgacgcagccaatgacaccgaattcggt
ctggccagctacttctacagccgcgacgtgggtcgcatcttccgcgtggccgaagcgctg
gagtacggcatggtgggcatcaacgtcggtattctcgcaaccgaacatgtgccgtttggc
ggcgtgaagcagtcgggtctgggtcgcgaaggctcacaccacggcatggacgactacgtc
gaaatcaaatacctgtgtgtgggtgacatcctgagctga
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