Hydrogenophaga crassostreae: LPB072_08840
Help
Entry
LPB072_08840 CDS
T04505
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00260
Glycine, serine and threonine metabolism
hyl00460
Cyanoamino acid metabolism
hyl00630
Glyoxylate and dicarboxylate metabolism
hyl00670
One carbon pool by folate
hyl00680
Methane metabolism
hyl01100
Metabolic pathways
hyl01110
Biosynthesis of secondary metabolites
hyl01120
Microbial metabolism in diverse environments
hyl01200
Carbon metabolism
hyl01230
Biosynthesis of amino acids
hyl01240
Biosynthesis of cofactors
hyl04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LPB072_08840 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LPB072_08840 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LPB072_08840 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LPB072_08840 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LPB072_08840 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LPB072_08840 (glyA)
Enzymes [BR:
hyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LPB072_08840 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AOW12935
UniProt:
A0A167H124
LinkDB
All DBs
Position
complement(1904433..1905677)
Genome browser
AA seq
414 aa
AA seq
DB search
MYDRNILIEQTDPELFAAIQAENARQEHHIELIASENYASPAVMAAQGTQLTNKYAEGYP
GRRYYGGCEHVDVAEQLAIDRVKQLFGADAANVQAHCGASANEAVFLAFLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLDANEAIDYDAMERKAHESKPKLIIAGASAYSLR
IDFERFAKVAKDVGAIFMVDMAHYAGLIAAGIYPNPVPHADVVTSTTHKSLRGPRGGLIL
MKAEHEKVINSAIFPGLQGGPLMHVIAAKAVAFKEALQPEFKVYQQQVLKNAQIVADTLT
ERGLRIISGRTESHVMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVR
IGTPAMTTRGFKDEEARATAHLIADVLDNPRDPANIEAVRAKVNALTARFPVYK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccgcaacatcctcatcgagcaaaccgaccccgagttgtttgcagccatccag
gccgaaaacgcgcgccaggaacaccatatcgagctgatcgccagcgaaaactacgcctcg
cccgccgtcatggccgcgcagggcacccagctcaccaacaaatacgccgagggctaccca
ggccgccgctactacggcggttgtgagcatgttgacgtggccgagcaactcgccatcgat
cgtgtgaagcaactgttcggggccgatgccgccaacgtgcaagcccactgcggcgcctcg
gccaacgaagccgtgttcctcgcctttctgaagcccggcgacaccatcatgggcatgagc
ctggccgaaggtggtcacctgacccacggcatggccctgaacatgagcggcaaatggttc
aacgtggtcagctacggcctcgacgccaacgaagccatcgactacgacgccatggagcgc
aaggcccacgaatccaagcccaagctcatcatcgccggcgcctcggcatacagcctgcgc
atcgatttcgagcgttttgccaaagtggccaaagacgtgggcgcgatcttcatggtcgac
atggcccactatgccggcctgatcgcagccggcatctaccccaaccccgtgccccacgcc
gatgtcgtgacctccaccacgcacaaaagcctgcgtggcccgcgcggcggcctgattctg
atgaaggccgaacacgaaaaggtcatcaacagcgccatcttccccggcctgcaaggcggc
ccgttgatgcatgtcatcgctgccaaggccgtggcattcaaggaagcgctccagcctgag
ttcaaggtctaccagcagcaagtgctgaaaaacgcccagattgtggccgacaccctgacc
gaacgcggcctgcgcatcatcagcggccgcaccgagagccacgtcatgctggtcgacctg
cgcgccaagggcatcaccggcaaagaagccgaagccgtgctgggcagcgcccacatgacg
atcaacaagaatgccatccccaacgaccccgaaaagcccatggtcaccagcggcgtgcgc
atcggcacccccgccatgaccacccgcggcttcaaggacgaagaagcccgcgccaccgcc
cacctgatcgccgacgtgctggacaacccgcgcgatccggccaacatcgaggccgtgcgc
gccaaggtcaacgccctgactgcccgcttcccggtgtacaagtga
DBGET
integrated database retrieval system