Hydrogenophaga crassostreae: LPB072_09180
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Entry
LPB072_09180 CDS
T04505
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyl03009
]
LPB072_09180
Enzymes [BR:
hyl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LPB072_09180
Ribosome biogenesis [BR:
hyl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LPB072_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
HEAT_EZ
Motif
Other DBs
NCBI-ProteinID:
AOW12996
UniProt:
A0A162P1C7
LinkDB
All DBs
Position
1973718..1974449
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AA seq
243 aa
AA seq
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MLALQDILFSQGFGTRRVCTGLVQQGWVEVGEARVRCNDPLEPFDETGFVFWVQGQRWVY
QRLAYLLLHKPAGYECSQKPSTYPSVYTLLPGPLRERGGGAAAGVQSVGRLDQDTTGLLL
MSDDGKFIHRMSSPRHHVPKVYEAQVKHPLTPEQVQRLLDGVVLDDDPKPVRAQACQAVS
EHHLRLTLTEGKYHQVKRMVAAVGNRVEGLHRSAIGGLSLDGGLPEGQWRWLTADEVSAL
TKK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgctagcccttcaggacatcctcttttcccaaggctttggtacgcgccgggtgtgcacg
gggttggtacagcaaggctgggttgaggtcggggaggcgcgcgttcgttgcaatgacccg
ttggagccgtttgacgaaacggggttcgttttctgggtgcagggccaacgctgggtgtat
caacgcctggcctatctgttgctgcacaaaccggcggggtacgaatgctcccagaagccc
agtacctaccccagtgtttacactttgttgcccggaccgctgcgcgaacgtggcgggggc
gctgctgctggcgttcagtccgtggggcggctggaccaagacaccacgggcttgctcttg
atgtctgacgatggcaaattcatccatcgaatgtcttcgccgcggcaccacgtgcccaag
gtctatgaggcgcaagtcaaacaccctttgacacctgaacaggtgcagcggttgctggat
ggcgtggtgttggatgacgaccccaagcccgtacgcgctcaagcttgccaggccgtttct
gagcaccatttgcggctgacgctgaccgaagggaagtaccaccaagtgaagcgcatggtg
gctgcggtgggcaatcgtgtggaggggttgcaccgctcggcgattggaggcttgtctctg
gatggaggcctgcccgaggggcaatggcggtggttgacagcggacgaggtgtctgcgctg
acgaaaaagtga
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integrated database retrieval system
