Hydrogenophaga crassostreae: LPB072_09840
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Entry
LPB072_09840 CDS
T04505
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl03030
DNA replication
hyl03430
Mismatch repair
hyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB072_09840
03430 Mismatch repair
LPB072_09840
03440 Homologous recombination
LPB072_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyl03032
]
LPB072_09840
03400 DNA repair and recombination proteins [BR:
hyl03400
]
LPB072_09840
Enzymes [BR:
hyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB072_09840
DNA replication proteins [BR:
hyl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB072_09840
DNA repair and recombination proteins [BR:
hyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB072_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_18
AAA_14
ResIII
AAA_19
AAA_5
RCF1-5-like_lid
Rad17
Herpes_Helicase
nSTAND3
TsaE
AAA_28
SKI
Motif
Other DBs
NCBI-ProteinID:
AOW13106
UniProt:
A0A167IHA3
LinkDB
All DBs
Position
2115552..2117522
Genome browser
AA seq
656 aa
AA seq
DB search
MSSYVVLARKYRPRNFAEMVGQSHVVQALSNALTSQRLHHAYLFTGTRGVGKTTVSRILA
KSLNCLGADGQGGITAEPCGVCQSCTDIDAGRFVDYTELDAASNRSVGEMQTLLEQSVYK
PVQGRFKVFMIDEVHMLTGHAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFN
LRPMAPQTVQEHLQHVLQAEGVSAEPNALRLIARAARGSMRDALSLTDQALSFGAGELPE
AVVRQMLGAVDRTHVFQLIDALGQGDGATVVNTIDGLRVNGLNAASTLEEMTTVLQRMAV
VQAVPDHANVASALDDPDAVEIERLAHSMPADETQLLYSLCLHGRAELGLAPDEYAALTM
VLLRLLAFKPAGASVEKKTLKSAPEARPESKSQGTPDGPEALGRPDSPPQVAPLKAAPAA
ARPVLTAVPVHATRSTTPPGPAAMPIAAPLAGSGQTAQPASAFNAEDEGGAESEDDAPPW
ESLSTERPEPAVVARSMRSIPVREAGVSTRLDQRREPEEKASARELQSTPEGDFWMGLVQ
ALIQAEAVTALVRELALQSQLVARDGERWLLRVERESLSQSNAPDRLASALATLEHRAQV
VVEIGTVNDSPALRLAALAAQKQREAEAIIMGDAFVQSVVRDFGGKIVPGTLKATG
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatatgttgtcctggcccgcaaataccgtccgcgcaatttcgccgagatggtg
gggcagtcgcacgttgtgcaggcgctgagcaacgcgctgacgtcgcaacggctgcaccat
gcctatttgttcacaggcacccggggcgtgggcaagaccaccgtgtcgcgtattttggcc
aaatcgctcaactgcctgggcgcagacgggcagggcggcatcaccgccgagccttgcggc
gtgtgccagtcatgcaccgatatcgatgcgggccggtttgttgactacaccgagctggat
gccgcctcgaaccggagcgtcggcgagatgcagacgttgctggagcagtcggtctacaaa
cccgtccagggacgcttcaaggtcttcatgatcgacgaggtacacatgctgaccgggcat
gccttcaacgccatgctcaagacgcttgaagagccacccgagtatttgaagttcgttctg
gccacgaccgatccgcaaaaagtgcctgtgacggtgctgtctcgttgcctgcagttcaat
ttgcggcccatggcgccgcagacggtgcaggaacacctgcagcatgtgttgcaggcagaa
ggcgtgagcgccgagcccaacgcgctgcgcctgattgcccgtgcggcgcgtggctcgatg
cgcgatgctttgtcgttgaccgatcaggccctgagctttggcgctggcgagttgcccgag
gccgtggtgcgccagatgctgggcgcggttgatcgaacccatgtgtttcagttgattgat
gcgctcgggcaaggggatggtgccaccgtggtgaataccatcgacgggttgcgcgtgaat
ggcctgaatgcggcttccacgcttgaagaaatgaccacggtcttgcaacgcatggcggtg
gttcaggcggtgcccgaccacgccaatgtggcgtctgcacttgacgaccccgatgcggtg
gaaatcgagcgactggcacacagcatgcccgcagacgaaacccagctgctctacagcctg
tgtttgcacggtcgcgcagagctggggctggcacctgatgagtacgcggccctgaccatg
gtgctgctgcgtttgctggctttcaaacccgccggcgcttcagtggaaaaaaaaactctg
aaatcggcgcctgaggcgcggccagagtcaaagtctcagggaacgccagacgggccagaa
gcgcttgggcgccctgattccccaccccaggtcgcgccactcaaggctgcgccagctgcg
gcaaggccggttttgaccgccgtgccggtccatgcaacccgctcgacaacccccccaggg
cctgcagcgatgcccatagcggcgccactggccggatctggccagactgcacaaccggca
tccgccttcaacgccgaggatgagggtggggctgagtccgaagatgacgcaccaccttgg
gagtctctgtccactgagcggcccgaacctgcggtggtggctcggtcgatgaggtccatt
ccggttcgcgaagccggtgtgtccacgcggctggatcaacggcgtgagcctgaagaaaaa
gcttcggccagagagctgcaaagcacgcccgagggagacttctggatgggcttggttcag
gccctgattcaggcagaagcggtcaccgccctggtgcgcgaactggcgctgcaatcgcag
ctggtggcgcgcgatggcgaacgttggctgctgcgcgtggagcgggaatcactcagccag
tccaatgcacccgatcgactggcctcggcattggcgacccttgaacacagggcccaggtg
gtggtggaaattggtaccgtcaacgactcacctgcgctcaggctggccgcgctcgcggcg
caaaaacagcgtgaagccgaggccatcatcatgggcgatgcgttcgtccagtcggtggtg
cgcgactttggcggcaaaatcgtgccaggcacactgaaagcaaccggttga
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