Hydrogenophaga crassostreae: LPB072_11770
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Entry
LPB072_11770 CDS
T04505
Name
(GenBank) tRNA-specific adenosine deaminase
KO
K01563
haloalkane dehalogenase [EC:
3.8.1.5
]
K11991
tRNA(adenine34) deaminase [EC:
3.5.4.33
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00361
Chlorocyclohexane and chlorobenzene degradation
hyl00625
Chloroalkane and chloroalkene degradation
hyl01100
Metabolic pathways
hyl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
LPB072_11770
00361 Chlorocyclohexane and chlorobenzene degradation
LPB072_11770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyl03016
]
LPB072_11770
Enzymes [BR:
hyl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.33 tRNA(adenine34) deaminase
LPB072_11770
3.8 Acting on halide bonds
3.8.1 In carbon-halide compounds
3.8.1.5 haloalkane dehalogenase
LPB072_11770
Transfer RNA biogenesis [BR:
hyl03016
]
Prokaryotic type
tRNA modification factors
Deaminases
LPB072_11770
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Gene cluster
GFIT
Motif
Pfam:
MafB19-deam
dCMP_cyt_deam_1
Abhydrolase_1
Abhydrolase_6
Bd3614-deam
Hydrolase_4
SNAD4
Motif
Other DBs
NCBI-ProteinID:
AOW13427
UniProt:
A0A167HTH0
LinkDB
All DBs
Position
complement(2543742..2545115)
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AA seq
457 aa
AA seq
DB search
MNAEARDAAFMGLALVQARAAALAGEVPVGAVVVRRGEVIAVGRNAPLTDHDPTAHAEIV
ALRAAAKALGNYRLEECELFVTLEPCAMCSGAMLHARLKRVVFGAADPKTGAAGSVVNLF
AQSQLNHQTEVVGGVMAEEGAQLLKLFFKERRVNLHPLREDALRTAENRFSNLPGFPWAP
HYISDLPSLNGLRLHYLDEGPDDAAVTWLCLHGNPAWSYLYRKMIPGFLASGGRVVAPDL
IGFGKSDKPKKDVAHSFTWHRQVLIELIERLGLKRVVLVVQDWGGLLGLTLPMQAPERYQ
GLLVMNTTLATGDAPLSPGFLAWREMCAKNPAFDVARLFARGNPQMGAEECAAYQAPFPD
QGHRAALRVFPAMVPEHPADDGAAVSRQARDFFRHEWLGKTFMAIGQQDPVLGEPVMRSL
AADLRGCCEPMVLPDAGHFVQEHGETVATEAVAFFAR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgaggccagagatgcggcgttcatgggactggcgctggtgcaagccagggcc
gcagcgcttgccggagaggttcccgtgggcgcggtggtggtgcgcaggggtgaagtaatc
gcagtggggcgcaacgcgccgctgactgaccacgatcccacggcccatgccgaaattgtc
gccttgcgcgccgcagcgaaagccctgggcaactaccgcctggaagaatgcgagctgttc
gtgacgctggaaccctgtgccatgtgcagcggcgccatgctgcatgcgcggctcaaacgt
gtggtgtttggtgccgccgaccccaagaccggtgctgcaggctctgtggtcaacctgttc
gcccagtctcagctcaatcaccagacggaggtggttgggggggtgatggcggaagagggc
gcccagctgctcaagttatttttcaaggagcgtcgcgtgaatctccatcccttgcgagaa
gatgcccttcgaacggctgaaaaccggttttcgaacctgcccggcttcccgtgggcgccg
cactacatcagcgacttgccaagcctgaatggcttgcggctgcactacctggatgaaggc
ccggatgacgcagcagtcacctggctgtgcctgcacggtaacccggcctggagctacctt
taccgcaagatgattcccggctttctggcgtcaggaggccgtgtggtagcacccgatttg
atcggctttggcaagagtgacaagcccaagaaagacgttgcacacagcttcacctggcac
cgacaggtgttgatcgaactcatcgagcggctgggcttgaaacgggttgtgctcgtggtg
caagactggggcggcttgctgggcttgaccttgccaatgcaggcgcccgagcgttaccag
ggtctgctggtgatgaacaccacattggccacgggcgatgcgcccttgtcgccaggtttt
ctggcatggcgcgagatgtgtgccaagaacccggcgttcgatgtggcgcgcctgtttgcg
cgcggcaatccgcaaatgggtgcagaagagtgcgcggcctaccaggcgccatttcccgac
cagggccaccgtgccgcactgcgtgtttttccggccatggtgccagagcacccggccgat
gacggcgccgccgtttcccgccaggcgcgcgacttcttccgccatgaatggctgggtaaa
accttcatggccattggccaacaagacccggtgctcggcgagccggtgatgcggtcgctc
gcagccgatttacgtggttgttgcgaaccaatggtgttgcccgatgcagggcattttgtg
caggaacatggcgaaaccgtcgccactgaagctgtcgcgttttttgcgcgatga
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