Hydrogenophaga crassostreae: LPB072_12705
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Entry
LPB072_12705 CDS
T04505
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyl03400
]
LPB072_12705
Enzymes [BR:
hyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB072_12705
DNA repair and recombination proteins [BR:
hyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LPB072_12705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
PDDEXK_9
Motif
Other DBs
NCBI-ProteinID:
AOW13585
UniProt:
A0A167HXV3
LinkDB
All DBs
Position
complement(2775915..2779211)
Genome browser
AA seq
1098 aa
AA seq
DB search
MNGSKQQAAYQINGEGASSAAFYAVACDPARSVAVEACAGAGKTWMLVARIVRALLDGTP
AQDILAITFTKKAAGEMRGRLQAELRRCETLADHELLEVMQAWGFTPAQAEARMEALRGL
NARLMAQGRAVQVRTFHSWFAALLRSAPLAVLQELRLPLTYELLEDDERAKALVWPRFYR
ALVDAPQERQDFFDSVGLHGRHQTLKSLDTALNKRVEFAMADAAGTLDGSVQSMAEAFPA
LDGCDEPAAFIRNPEPQSLLWDAARILGAATAKTFSAKGVELETALSEGRFEGVCTALLT
QKNEDRQFGAKIAQIDRVREAQALVRWLLEAEQQQRAWLHQQRLTRLTRVLLRVYADLKR
ERGWVDMNDLESAAQRLLADAELSGWMQQRMDARVSQLLIDEFQDTNPLQWQALYGWLSA
YAGAGPGEAPSVFLVGDPKQSIYRFRRAEPQVFKAAQVFVVEGLGGALLSCDHTRRCSPL
VVDTLNAVMQEAIAAGEYADFRDHTTHSEAAGEVLVLPAISRQAKAPAGNGQDAEVIWRD
SLTMPRVPPEEEGYAALEAQQAARWVADHIAQGTPPGKIMVLSRKRERLGWMHEALQALG
IASEQPEKLELNQIGAVQDVIALLDALVSPQHDLSLARALKSPLFGWSDGDLVTLADRVN
LLRHGAEGAATGVSWWLALQDLAGDNQGESSRMVETAARLQRYRQWTRQWPPHDALSAIY
EDSDALARFAEIAQSGQRAAVTAALRDVLTQSLAQDGGRYLSAYRFVRALKAGGNKLATV
PKANAVRLLTVHGAKGLEAKTVLLLDTDSGAPKSETMGVLIDWPGEAPAPRRFVFLERET
APPVCAQDLLANEQRARALEEINALYVALTRAEERLVVSSFEPHRRGERATWWQRLNLRG
AAATVPEVSNASALEPLAPFGMLGLPTLPVASPAPVGVGSSVVPEADLRTRMGLAMHRLL
QWHPTHADFEWTDVHTLAAGRAFELSHDEAVEATAMAQRVVQGEGAWAWDAAQLQQWGNE
VELFWQGEGLRLDRLVQGRIDGDWWVIDFKSHEQPETRPDLLAQIRRYGQAVAHAQPGAR
VRLAFINALGQWREVEPS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgaacggctcgaaacaacaggcggcttatcaaatcaacggcgaaggggccagcagcgcg
gcgttttacgccgtggcatgcgacccggcgcggtcggtggcggtggaggcttgcgcggga
gcgggcaagacctggatgctggtggcccgcatcgtgcgggcattgctcgatggcacaccg
gcgcaagacattctggccatcaccttcaccaaaaaagccgccggagagatgcggggtcgg
ctccaggccgaattgcgccggtgtgaaaccctggccgatcacgaactgcttgaggtcatg
caggcgtggggattcacccccgcgcaagccgaagcccgcatggaggctttgcgcggtttg
aatgcgcgcctgatggcgcagggccgggcggtgcaggttcgaacttttcacagctggttt
gcagccttgttgcgcagcgcgccattggcggtgctgcaagagttgcgtttgccgctgacc
tatgagttgctggaggacgacgagcgggccaaagccttggtgtggccgcggttttaccgg
gcgctggtggatgcacctcaggagcgccaggactttttcgacagcgtgggcctccatggc
cgccatcagaccctcaagtcgctcgacacggcattgaacaagcgcgtggagttcgccatg
gccgacgccgcgggcacgcttgacggctcggtgcagtccatggccgaggcctttcccgcc
ctggatggttgcgacgaaccggcggcgttcattcggaatccggaaccacaaagcctgttg
tgggacgcagcccgtattctgggcgcggctaccgccaaaaccttttcggccaaaggtgtg
gagctggagacggcgctgagcgaggggcgttttgagggcgtgtgcacggccttgctgacg
cagaaaaacgaagaccggcaattcggcgccaagatcgcgcagattgatcgggtgcgtgaa
gcgcaggccctggtgcgctggttgctggaggccgaacaacagcagcgcgcctggttgcac
cagcagcgcttgacccgcttgacgcgtgtgctgctgcgtgtctacgccgatctgaagcgg
gagcgcggctgggttgatatgaacgatctggagtcggctgcccagcggttgctggccgat
gccgagctctcgggctggatgcaacagcgcatggacgcgcgggtgagtcagcttctgatt
gacgagtttcaagacaccaacccgctgcagtggcaggcgctctacggctggctgtcggcc
tatgcaggtgccgggccgggggaggctccgagcgtgttcctggtgggcgaccccaagcaa
tccatctaccggtttcgacgggcagagccacaggtgttcaaagcggcgcaggtgtttgtg
gtggaaggcctgggcggtgcgctgctcagctgtgaccacacgcgccgctgttcgcccctg
gtggttgacaccttgaacgccgtgatgcaggaagcgatcgcggctggcgagtacgccgat
tttcgcgaccacacgacacacagcgaagcggcgggtgaggtgctggtgttgcccgccatt
tcccgtcaagccaaggcgccggccggcaacggccaggacgccgaagtgatttggcgcgac
agcctgaccatgccgcgcgtaccgcccgaagaagagggctacgccgcactggaagcgcag
caggcggcccgctgggtggcggatcacatcgctcaaggcacgccgcccggcaagatcatg
gtgttgtctcgcaagcgggagcggctgggctggatgcacgaagccttgcaggccctgggc
attgccagcgagcaacccgagaagctggagctcaaccagatcggggccgtgcaggacgtg
atcgcattgctcgacgcgctggtgtcgccgcagcacgacctgagcctggcccgcgcgctc
aagtcgcccctgtttggttggagcgatggcgacttggtcacgttggccgatcgcgtcaat
ctgttgcgccatggggcagaaggtgctgccaccggcgtgagctggtggctggcgcttcaa
gatctggccggcgacaaccagggtgaatcctctcggatggtggaaaccgccgcgcgtttg
cagcgctaccggcaatggacccgtcaatggccaccacacgatgccttgtcggcgatttac
gaagactcggacgccttggcgcgcttcgccgagatcgcccaatcaggccagcgcgcggcg
gtgacggcggctttgcgcgatgtgttgacgcagtcgctggcgcaagacggcgggcggtat
ttgagcgcctaccgatttgtgcgtgcgctcaaggcgggcggcaacaaactggcgacggtg
cccaaggcgaatgctgtgcgcctgctcacggtgcacggcgccaaagggctggaagccaag
acggttttgctgctcgacaccgacagcggtgcaccgaagtcggaaaccatgggggtcctg
atcgactggccgggcgaagcgcctgcgccgcgccgttttgtttttcttgagcgcgaaacc
gcgccaccggtgtgtgcgcaagacttgctggccaacgagcagcgcgcccgcgcgctggaa
gaaatcaacgccctctatgtggcgctcacccgggccgaagaacggctggtggtgtccagt
tttgaaccccacaggcgaggcgaaagggccacctggtggcaacggctgaatttgcgcggt
gccgcagcaaccgtgcctgaagtctccaatgcttcggcgctggaacccctggcgccgttc
ggcatgctgggcttgccaacgttgccggtagcgtcacctgctccagtgggcgttgggagc
tcggtggttccagaagccgatttgcgcacgcgcatgggcctggcgatgcaccgcttgctg
cagtggcaccccacccacgccgacttcgaatggacagacgtgcacaccctggccgcaggc
cgcgccttcgaactcagccacgatgaggcagttgaggccacggccatggcgcagcgcgtg
gtgcaaggcgagggcgcatgggcttgggacgccgcgcaactccagcaatggggcaacgag
gtggagctgttttggcaaggcgagggcttgcgcctggaccgactggtgcagggcagaatc
gacggtgactggtgggtgattgatttcaagagccacgaacaaccggaaacacggcctgat
ttgctggcacagatcaggcgctatgggcaagccgttgcccatgcccaaccgggcgcccgc
gtgcgcctggcctttatcaatgcgctgggacaatggcgcgaagttgaaccctcatga
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