Hydrogenophaga crassostreae: LPB072_13060
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Entry
LPB072_13060 CDS
T04505
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyl03016
]
LPB072_13060
Enzymes [BR:
hyl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LPB072_13060
Transfer RNA biogenesis [BR:
hyl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB072_13060
Prokaryotic type
LPB072_13060
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AOW13641
UniProt:
A0A167HZJ1
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All DBs
Position
complement(2854766..2855755)
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AA seq
329 aa
AA seq
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MQGQRTRVQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLHLDADKTYETVIRLGLKTSTADAEGDVIEARGVTCTPGQVVEALDLFMGE
IEQIPPMHSALKKDGKPLYEYARDGETVEREARRVTIHDLDLLDMQLTGDEPHLHLRVRC
SKGTYIRTLGEDIGEALGCGGHLTMLRRVATGPFSAAQCVSLETLEAESEAQRAAHLLPV
PALLPDHTPVTLDEEGAARFLSGVRRRGAWPNESHVAVYGPVPATERLRVNVTTLLGSAH
TTGGELIPGRLLSPIEIQQILETETELSS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggccaacgcacgagggtgcagcggcgccctgtgcacggggtgctgttgctcgat
aaaccgctgggtctctccagcaaccaggctttgcaaaaagccaagtggttgctgcgcgcc
gaaaaggcaggccatactggcacgctcgacccgttggccacgggcgttttgcctttgtgc
ttcggtgcggcgacgaaattcagccaactgcatctggatgcagacaaaacatacgagacc
gtgatccggttgggtttaaaaacctcgacagcggatgccgaaggcgatgtgattgaagcc
cggggagtcacttgcacgccgggccaagtggtcgaagccttggatctgttcatgggcgag
attgaacagattccgcccatgcacagcgcgttgaagaaagacggcaaaccgttgtacgaa
tatgcacgcgatggtgaaacggtagagcgcgaagcgcgtcgcgttaccatccacgacctg
gacctgctcgacatgcagttgacgggcgatgagccgcacctgcaccttcgcgtgcgctgc
agcaaaggtacctacattcgtaccttgggtgaagacattggcgaagcgctgggctgtggt
ggtcatctgaccatgctgcgccgcgtggccaccggccctttctctgctgcgcaatgtgtc
tcgctggaaaccctggaggcggaaagcgaggcgcagcgtgcggcccatcttttgccggta
cccgcgctcttgcccgatcacacgccggtgacgctggatgaagaaggcgcagcgcgtttt
ctgagcggcgttcgccgtcggggcgcctggcccaacgaatcccatgtggccgtctatggt
ccggtgcccgctaccgagcggttgcgcgtcaatgtgacgaccttgcttggcagtgcgcac
accactggcggtgaactcatcccggggcggctgctgagccccatcgaaatacagcaaatc
ctggaaactgaaacggaactctcatcatga
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