Hydrogenophaga crassostreae: LPB072_13615
Help
Entry
LPB072_13615 CDS
T04505
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyl03000
]
LPB072_13615
Transcription factors [BR:
hyl03000
]
Prokaryotic type
Helix-turn-helix
Other families
LPB072_13615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_5
PAS_4
AAA
Mg_chelatase
HTH_30
HTH_23
AAA_2
AAA_3
HTH_22
HTH_29
P22_Cro
Xre-like-HTH
HTH_17
HTH_7
NUMOD1
IclR_C
AAA_16
HTH_11
HTH_Tnp_ISL3
NB-ARC
sCache_3_3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AOW15638
UniProt:
A0A167I3T4
LinkDB
All DBs
Position
2969096..2971123
Genome browser
AA seq
675 aa
AA seq
DB search
MTASKPREARGLRASPPVASAMDSTNLIHQSHRRSLDYGITAHAEPDFSSPSRGLLNDAL
DENRFLFQHAAPVMETLYDQIVNTHSMVLLTSARGMVLHSLGDTDFLEKASRVALTPGMD
WSEENKGTNAIGTALTEEEALTVHGNQHFMNANKVLTCSCAPIFDPYGQVIGALDVTGDH
RSFHQHTLALVRMSAQMIENHMFADIFPKAIRIHFHTRSEFLGTLVEGIAVFSPEGRFIS
ANRSAQFQIGLPFAALKAHTFSSLFGIPVSALSELFTGTTPNPKQLCLHNGVSVWARVKL
KAQNAWMAHPQDVQPPPTPANAQPAPLKQTGKRMQLSSLQYLDTGDPQVSSVIHKLRRVS
GRDIPVMILGETGTGKDLLAQAIHGDSSRSGQPFVSVNCASIPDNLIESELFGYEEGAFT
GARKKGSIGKILQANGGTLFLDEIGDMPKHLQARLLRVLQERKVNPLGSTKEMEVDVAVI
SATHKNVKDMIARGDFREDLYYRLNGLVVRLPALRERTDFQLVVQKILKSLCENGQRVAI
SLTVMDLLRRYHWPGNFRQLHNLLRTAVVMAGCEGEILMEHLPDDFLEEIEHGYNAHLPP
NVLEAIAHSHATATPTAVPSTPDPDGHRLQDVALSAMANMLRLHKGNVSAAAKALGVSRN
TIYRKRDQLPPDVLG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttccaagccccgagaggcgcgtgggctgagagccagcccacctgtggccagt
gccatggattcgaccaacctgatccatcagtcgcatcgccgctcgcttgactacggcatc
acggcccacgccgagcccgacttttccagcccttcgcgcggcctgctcaacgacgcactg
gacgagaaccgctttctcttccagcacgcggctcccgtgatggaaacgctctacgaccag
atcgtcaatacccacagcatggtcttgctgacctcggcacgcggcatggtgctccattct
ttgggggacaccgattttcttgaaaaagcctcacgcgtggcgctcacccccggcatggat
tggtcagaagagaacaagggcaccaacgccataggcacggcgctcaccgaagaagaagcc
ctcaccgttcatggcaaccagcacttcatgaacgccaacaaggtgttgacctgttcgtgc
gcgcccatctttgatccttatggtcaggtgatcggcgcgctcgatgtcactggtgaccac
cgcagctttcaccagcacaccctggccctggtgcgcatgtcggcccagatgatcgagaac
cacatgttcgccgacatcttccccaaggccatccgcatccatttccacacccgctccgag
tttctcggcacgctggtggaaggcatcgcggtgttctcgccggaaggccgcttcatctcg
gccaaccgcagcgcccagtttcagattggcctccccttcgcggccctcaaagcgcacacc
ttctcgtccctgtttggcattcctgtttccgccttgagcgaactcttcaccggcaccacc
cccaaccccaaacagctgtgtcttcacaacggcgtttcggtctgggcacgggtgaagctc
aaagcacaaaacgcctggatggcccacccacaggacgtgcagcccccccccacgccagcc
aacgcccagcctgctccgctcaagcaaacgggcaaacgcatgcagctgtcatcgctgcag
tacctggacaccggagacccgcaggtctcttccgtcattcacaagctgcggcgggtatcg
ggacgtgatattcccgtgatgatcctgggtgaaacgggcacgggtaaagacctgttggcc
caggctatccatggcgactccagccgctcgggccagccttttgtctcggtcaactgcgca
tcgattccagacaacctgatcgagtcggagctgtttggttacgaagaaggtgccttcacc
ggtgcgcgcaagaaaggctctatcggcaagatcctgcaggccaatggtggaaccctgttc
ctcgatgaaattggcgacatgccgaaacatctgcaggcgcgtttgctgcgtgtgttgcaa
gaacgcaaggtcaacccgctgggttcgaccaaggagatggaagtcgatgtcgctgtgatc
agcgcaacccacaaaaacgtcaaggacatgattgcgcggggtgactttcgcgaagacctg
tattaccggctgaatggcctggtggtgcgtttgcccgccttgcgtgaacgaaccgacttc
cagctggtggtgcagaagattctgaaatccctgtgcgagaacggccagcgtgtggccatt
tcgctaacggtcatggacctgctgcggcgctaccactggcccggcaatttccgccagctg
cacaacctgctgcgcacagcggtggtgatggcaggctgcgagggggagatcctcatggaa
catttgcctgacgattttcttgaggaaatcgagcatggttacaacgcacacctgcccccc
aatgtgctggaagccattgcgcactcccatgccacggcaacgccaacggccgtgccatcc
acgcccgatcccgacggtcaccggctacaagatgtggcattgagcgccatggccaacatg
ctgcgcctgcacaaaggcaatgtgtcggccgccgccaaagcactcggcgtttcacgcaac
accatctaccgcaaaagagaccagttgccgcccgacgtgctgggctga
DBGET
integrated database retrieval system
