Hydrogenophaga crassostreae: LPB072_13890
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Entry
LPB072_13890 CDS
T04505
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyl03009
]
LPB072_13890
Enzymes [BR:
hyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LPB072_13890
Ribosome biogenesis [BR:
hyl03009
]
Prokaryotic type
rRNA helicases
LPB072_13890
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
YlmH_RBD
AAA_30
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AOW13771
UniProt:
A0A162W6H1
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All DBs
Position
3024585..3025979
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AA seq
464 aa
AA seq
DB search
MTTAPQTDFSALPLTPATLANLTQLGYTAMTPIQAACLPSALLGKDIIAQAKTGSGKTAA
FALALLANLNPRRFAVQTMVLCPTRELADQVTTEIRRLARAEDNIKVVTLCGGVPLRGQF
ATLEHGAHIVVGTPGRLMDHLERGSLKLDALNTLVLDEADRMLDMGFFEDIVKVAKQCPK
ERQTLLFSATYPEGIAKLSAQFMKEPITIKVEAQHSDSQIEQRWYEVKSNERLHAVGLLL
AHFRPASTIAFCNTKAQCRDLVEVLRGQGFSALALFGELEQRERDQVLVRFANRSCSVLV
ATDVAARGLDIANLEAVINVDVTPDSEVHVHRIGRTGRAGESGLALNLASMNEMGYVGKI
EQLQGRESDWHPVSELTPASKEPLVPAMTTVHIQGGRKEKIRPGDVLGALTADLGYTREQ
VGKINVNEWSTYVAVDRNIAQQVASRLNDGKIKGKSVKVRVLED
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgctccccagaccgacttctccgccctccccctcaccccggccaccctggcc
aacctgacccaactgggatacacggccatgacgccgatccaggctgcctgcctgccttcg
gccctgctgggcaaagacatcattgcccaggccaagaccggcagcggcaagaccgccgcc
ttcgccctggccctcctggccaacctcaacccgcgccgcttcgccgtgcaaaccatggtg
ctctgccccacgcgtgaactggccgatcaggtgaccaccgaaatccgccgtctggcccgc
gccgaagacaacatcaaggttgtcacgctctgcggcggcgtgcccctgcgtggacagttc
gccacgctggagcatggcgcccacatcgtggtcggcacgcccggccgtctgatggaccac
ctggagcgcggcagcctgaagctcgatgcgctcaacaccctggtgctggacgaagccgac
cggatgctcgacatgggcttcttcgaggacatcgtcaaagtcgccaagcagtgtccaaaa
gagcgccagaccctgctgttttcggccacctaccccgagggcattgccaaactcagcgcc
cagttcatgaaagaaccaatcaccatcaaggtcgaggctcagcacagcgacagccagatc
gaacagcgctggtacgaagtcaaaagcaacgaacggctgcacgctgtaggccttctgctg
gcccacttccgccccgccagcaccatcgctttctgcaacaccaaggcgcaatgccgcgac
ctcgttgaagtgttgcgcgggcaaggcttcagcgctttggccttgtttggcgaactggag
cagcgcgagcgcgatcaggtgctggtgcgtttcgccaaccgcagttgctccgttttggtg
gccaccgatgtggccgcgcgcgggctggacatagccaacctggaagcggtgatcaatgtg
gacgtgacgcccgactccgaggtgcacgtgcaccgcatcggccgcaccggccgtgcaggc
gagagcggcctggcgctgaacctggccagcatgaacgaaatgggctacgtgggcaagatc
gagcagttgcaaggccgcgagtctgactggcacccggtgtccgaactcacaccagcgagc
aaagagcccctggtgcccgccatgaccacggtgcacatacagggcggccgcaaagaaaag
atccgccccggcgacgtgctgggcgcgctcaccgccgatctgggctacacccgcgagcag
gtaggcaagatcaatgtgaacgaatggtcgacctatgtggccgtggaccgcaacattgcc
caacaggtcgccagccgcctgaacgacggcaagatcaagggcaagagcgtgaaggtgcgg
gtgctcgaagactga
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