Hydrogenophaga crassostreae: LPB072_14100
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Entry
LPB072_14100 CDS
T04505
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyl03032
]
LPB072_14100
03036 Chromosome and associated proteins [BR:
hyl03036
]
LPB072_14100
03400 DNA repair and recombination proteins [BR:
hyl03400
]
LPB072_14100
DNA replication proteins [BR:
hyl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LPB072_14100
Chromosome and associated proteins [BR:
hyl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LPB072_14100
DNA repair and recombination proteins [BR:
hyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LPB072_14100
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
ALF
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AOW13803
UniProt:
A0A162Z810
LinkDB
All DBs
Position
complement(3067246..3067518)
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AA seq
90 aa
AA seq
DB search
MNKTELVEHIAKNADISKAAAARALDSTITAIRTTLKKGGTVSLVGFGSFAVTKRPARKG
RNPRTGEEIKIKAAKVPKFRPGKALKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagaccgaactcgttgagcacattgctaaaaacgctgacatttccaaggcggct
gcagcgcgtgcactggactccaccatcaccgccattcgcacgaccttgaaaaaaggcggc
actgtttccttggtcggttttggttcgtttgctgtgaccaagcgcccagctcgcaagggt
cgcaacccccgcaccggcgaagagattaaaatcaaggcagccaaggtgcccaagttccgt
ccaggcaaggctttgaaagacgcgctcaactga
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