Hydrogenophaga crassostreae: LPB072_15740
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Entry
LPB072_15740 CDS
T04505
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl03030
DNA replication
hyl03430
Mismatch repair
hyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB072_15740
03430 Mismatch repair
LPB072_15740
03440 Homologous recombination
LPB072_15740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyl03032
]
LPB072_15740
03400 DNA repair and recombination proteins [BR:
hyl03400
]
LPB072_15740
Enzymes [BR:
hyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB072_15740
DNA replication proteins [BR:
hyl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB072_15740
DNA repair and recombination proteins [BR:
hyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB072_15740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
PAS_4
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AOW14077
UniProt:
A0A163CP14
LinkDB
All DBs
Position
complement(3425983..3428178)
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AA seq
731 aa
AA seq
DB search
MSGQQKTDRRLWWLLGMAGLVSVAWLGATIGLVGSTLDDESRATVWRLLGEQSVLLLLTW
GAGMGAIAWALKRWFDHWVTPSVQLAEEAQVVLKTDVVRNLPLKGNVETQALAGLFNQLV
AQREELRSEMDAKVNLAAEGIEQEKSRLAALMSELTQSVVVCNLDGRVLLYNNRARMQFR
ALSQAPGVAGGAELIGLGRSIYGVFDQRLVAHALDSIRQRLLRGAAQPSAQFVTTTPSGQ
LLRVQMAPVRAATTQASDADRELTGFVLMLDNITREFEAESAKDQVLLSLTEGSRAALAN
MQAAIDMLDFPDLEPAMRERFLGVVRDEIRSLSQRITALESGSADSVKSRWPLEDMLGSD
LVNAAIKRIEVTARVPASAVDVDSSLWLKVESFSLLQALSYLTARLSEEFSVKFVQLRLG
LAQGSAGKAQLDLIWSGQVMSTETVMSWEMDVIKVGAETTRITVRDVIERHGGAFWFERE
RTRHQAFFRFLLPLANPQEQAEATAALQPTDSRPEYYDFDLFKTTELTHALDDRLLSELT
YTVFDTETTGLNPSQGDEIIQIGAARIVNNKLLKQECFEQLVDPRRSIPAATIPIHGISP
DMVQGQPTIDQVLPAFHAFAQDTVLVAHNAAFDMRFLQLKEQQTGMVFDHPVLDTLLLSA
VLHPSQDSHRLEALSERFNVPIVGRHTAMGDAMVTAEVFVKLIPLLAEKGILTLGQAREA
AQKTYYARLKY
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcaacaaaaaaccgataggcgcctgtggtggctgctgggtatggcgggcctg
gtgtcggtggcctggttgggggccacgattggtctggtgggctcgacgctggacgatgaa
agccgtgcaacggtgtggcgattgctcggtgagcaatccgtcttgctgttgctcacctgg
ggtgctggcatgggggccatcgcatgggcgctcaagcgctggttcgatcattgggtgacg
ccatcggtgcaactggctgaggaggcccaggtggtgctcaagaccgatgtggttcgcaac
ctgccgctgaagggcaatgtggaaacgcaggcgctggcgggcttgttcaatcaactggtg
gcgcaacgcgaagagctgcgcagcgagatggatgccaaggtgaacctcgcagccgaaggc
atcgagcaggaaaaatcgcggttggcggctttgatgtcggagctcacgcaaagtgtggtc
gtctgcaaccttgatggccgtgtcttgctgtacaacaaccgtgcacgcatgcagtttcgt
gcgctctcccaagcgccgggggtggcgggaggtgccgagttgatcgggctggggcgttcg
atttacggggtgtttgatcaacgtctggtggcccatgccctggacagcattcgccaacgc
ctgctccgaggcgcagcccagccctcggctcagtttgtcaccaccacgccttccgggcaa
ttgctgagggtgcaaatggcgccggttcgcgcagcgaccacgcaagcctctgacgccgac
cgtgaactcacgggatttgtactgatgctcgacaacatcacgcgcgaattcgaagccgag
tcagccaaagaccaggttctgctctcgctgaccgaaggcagccgggcggcgttggccaat
atgcaggccgccattgacatgctcgattttccagatctggaacctgcgatgcgtgagcgg
tttctgggcgtggtgcgcgatgaaatccgttcgttgagccagcgcatcacggcccttgag
agtggctctgccgattccgtcaaatcgcgttggccgctggaggacatgctgggctccgac
ctggtcaacgctgcgatcaaacgcatcgaggtgaccgccagagtgccagcctcggccgtg
gatgtggacagcagtttgtggctcaaggtcgagagtttttcactcctgcaagcactgagc
tacctcaccgcgcggctgtctgaggagttttcggtgaagttcgtgcaattgcgtctggga
ctggcccagggcagcgccggcaaagcgcagcttgatttgatctggtcgggtcaggtcatg
agcaccgagaccgtgatgagctgggagatggatgtgatcaaggtgggggcagaaaccacg
cgaatcactgtgcgcgatgtcatcgagcgccatgggggtgcattctggtttgaacgcgaa
cgcacgcgccaccaggcgttttttcgctttttgctgcccctggcgaacccgcaggagcaa
gcggaggcaactgcggcgttgcagcccacagacagccgccccgagtattacgactttgac
ttgttcaagaccacagagttgacccacgcgcttgatgaccgcttgctcagcgaattgacc
tacaccgttttcgataccgaaaccacaggcctcaacccatcacagggtgatgaaatcatc
cagattggtgcggcccgcatcgtgaacaacaagctgttgaaacaagagtgcttcgagcag
ttggtggaccccaggcgttcgatccctgcggccaccattccgattcacggcatctcgccc
gatatggtgcaagggcagccaaccatcgatcaggtcttgccagcgtttcacgcgtttgca
caggacacggtactggtcgcacacaacgcagcgttcgacatgcggtttctgcaattgaag
gagcagcagacggggatggtgtttgatcacccggtgctcgacacgctgttgttgtctgcc
gtgttgcaccccagtcaggactcccaccggctggaagcgctgtcagagcgcttcaatgtg
ccaatcgtcggccggcacaccgcaatgggtgatgccatggttacagccgaagtatttgtg
aaactgattcctctgctggcagagaagggcattctcacgctggggcaggcgagggaagcc
gcgcagaagacgtattacgcaagactgaaatattga
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