Hydrogenophaga crassostreae: LPB072_16550
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Entry
LPB072_16550 CDS
T04505
Name
(GenBank) peptidase M20
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00300
Lysine biosynthesis
hyl01100
Metabolic pathways
hyl01120
Microbial metabolism in diverse environments
hyl01230
Biosynthesis of amino acids
Module
hyl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LPB072_16550
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hyl01002
]
LPB072_16550
Enzymes [BR:
hyl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LPB072_16550
Peptidases and inhibitors [BR:
hyl01002
]
Metallo peptidases
Family M20
LPB072_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AOW14209
UniProt:
A0A167IXM6
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All DBs
Position
3602964..3604217
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AA seq
417 aa
AA seq
DB search
MTTPQDQIDTWIDAHFDDEVRFLQELVRVPTDTPPGNNAPHAERTAELLAAMGLEAEKHA
VPEAQVKAAGLESITNLILRRRYGEGGKTIALNAHGDVVPPGEGWTHDPYGGEIVDGKIY
GRATAVSKCDIASFTFAIRALESLGAKLAGGVELHVTYDEEFGGVVGPEWLLDKGLTKPD
LMIAAGFSYQVVVAHNGCLQLQATVHGDMAHAAIPDSGTDALQAATHILSALYALNADYL
KVTSKVEGITHPYLNVGQIAGGTNTNVIPGKVVLNIDRRMIPEEDPTEVEASIRRTIAEA
AASYNPPRGGKEVTVDVKRLLLSRAMKPLPGNQPLVQAIQKNAQAVMGEAIPALGTPLYT
DVRLYVERGIPGVIYGAGPRTVLESHAKRADERLDLKDLRAATKVIARSLFDLLQPN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccccccaagaccagatcgacacctggatcgacgcccatttcgacgacgaggtg
cgtttcctgcaagagctcgtgcgcgtgcccacagacacgccaccgggcaacaacgcaccc
cacgccgagcgcaccgccgaactgttggcggccatgggtctggaagcggaaaagcatgcg
gtgcccgaagcgcaagtcaaagccgcagggcttgagtccatcaccaacctgattctgcgc
cgccggtatggcgaaggcggcaaaaccattgcactcaacgcccacggcgacgtggtgccg
cccggcgaaggctggacccacgacccctatggcggcgagatcgtcgacgggaaaatctat
ggccgcgccacagcggtgagcaagtgcgacatcgccagcttcacctttgcgatccgggcc
ctcgaatcgctgggtgcaaagctcgcaggcggcgtggaactgcatgtcacctacgacgag
gagttcggtggcgtggtgggtcctgagtggctgctggacaaaggcctcaccaaacccgac
ctgatgatcgccgccgggttcagttaccaggtcgtggtggcgcacaacggctgcctgcaa
ttgcaggccacggtgcatggcgacatggcccatgccgcgattcccgactccggcacggac
gcgctgcaagccgcgacccacatcctgagcgctctctacgccctgaatgccgattacctc
aaggtcacctccaaagtcgagggcatcacccacccttacctcaatgtgggccagatcgcc
ggtggcaccaacaccaacgtcatccccggcaaagtggtgctcaacattgaccgccgcatg
attcccgaagaagacccgaccgaggtcgaggcatcgatccggcgcaccatcgccgaggcc
gcagccagctacaacccgccgcgcggcggcaaggaagtgaccgttgatgtcaagcgcctg
ctgctgtcgcgcgccatgaagcccctgcctggcaaccagccgctggtgcaggccattcag
aaaaacgcacaggcggtgatgggcgaagccataccggcgcttggtacgccgctttacacc
gacgtgcgcttgtatgtggagcgaggcattcccggtgtgatctatggggccgggccacgc
accgtgctggaatcgcatgccaaacgggccgatgagcgcctcgacctgaaagatctgcgc
gcggccaccaaggtgattgcgcgctcgttgtttgatttgctgcaacccaattga
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