Hydrogenophaga crassostreae: LPB072_16755
Help
Entry
LPB072_16755 CDS
T04505
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LPB072_16755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyl03019
]
LPB072_16755
03009 Ribosome biogenesis [BR:
hyl03009
]
LPB072_16755
03036 Chromosome and associated proteins [BR:
hyl03036
]
LPB072_16755
Enzymes [BR:
hyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LPB072_16755
Messenger RNA biogenesis [BR:
hyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LPB072_16755
Ribosome biogenesis [BR:
hyl03009
]
Eukaryotic type
90S particles
RNase
LPB072_16755
Prokaryotic type
rRNA processing factors
LPB072_16755
Chromosome and associated proteins [BR:
hyl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LPB072_16755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
RM44_endonuclase
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AOW15740
UniProt:
A0A163CNF6
LinkDB
All DBs
Position
complement(3652492..3653172)
Genome browser
AA seq
226 aa
AA seq
DB search
MRAELLALQQRLGHVFSNPRLLERAVTHRSFSADHNERLEFLGDSVLNLAVSSLLFEKLN
ELPEGDLSRVRANLVKQDTLFQIAQNLGVAVCLRLGDGEKRSGGQKRPSILADALEALIG
AVYLDAGFDVAAALVRRLYGGMELNAQMSAMEKDAKTELQELLQGRKMKLPVYRVVATLG
EAHKQTFDVECALTESGHRERGIGASRRAGEQAAAAAMLQHLSTQG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgagggcggagttgctggcgctgcaacagcgtttgggtcatgtgttttcaaatccgcgt
ttgctggaacgcgcggtcacccatcgcagcttcagcgccgatcacaatgaacgtctggag
ttcttgggtgactcggtattgaacttggcggtctcgagcttgttgtttgaaaagctgaac
gagctacccgagggcgatttgtcccgtgtgcgcgccaacttggtcaaacaagataccttg
ttccaaattgcacaaaacctcggcgtggcggtctgtttgcgtttgggcgatggcgaaaag
cgttctggtggacaaaagcgaccgtcgattctggctgatgcgctcgaggcgttgatcggc
gccgtgtacctcgatgcggggtttgatgtggcggctgctttggtgcgccgcttgtacggt
ggcatggagctcaatgcgcagatgagcgccatggaaaaagacgccaagaccgaattgcaa
gagttgttgcaggggcgcaaaatgaagttgcccgtctaccgagtcgtggcaaccttgggt
gaggctcacaagcaaacatttgacgtggagtgcgcgttgacagagtccggccaccgagaa
cgtggcataggtgcttcgcggcgtgccggtgagcaagccgccgcagcagccatgttgcag
cacctttcaacccagggttga
DBGET
integrated database retrieval system
