KEGG   Hydrogenophaga crassostreae: LPB072_17335
Entry
LPB072_17335      CDS       T04505                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
hyl  Hydrogenophaga crassostreae
Pathway
hyl00300  Lysine biosynthesis
hyl00470  D-Amino acid metabolism
hyl01100  Metabolic pathways
hyl01110  Biosynthesis of secondary metabolites
hyl01120  Microbial metabolism in diverse environments
hyl01230  Biosynthesis of amino acids
Module
hyl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hyl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LPB072_17335
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LPB072_17335
Enzymes [BR:hyl01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     LPB072_17335
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: AOW14338
UniProt: A0A167IV52
LinkDB
Position
3776780..3778018
AA seq 412 aa
MNPFSSTLLRDLATEYGTPLWVYDAATIRQRINDLKRFDTVRFAQKANSNLHLLRLMRDQ
GVVVDAVSRGEIERALAAGFTAAPNAQGASGIVFTADLFDHATLDTVVQHAVPVNAGSID
MLGQLGQRSKGHRVWLRINPGFGHGHSNKTNTGGEHSKHGIWHTELPAALAAVKEHGLHL
VGLHMHIGSGVDYGHLEEVCAAMVTLVKNCGADLEAISAGGGLSIPYQADEPHIDTDHYF
SLWDAARREIASHLGHAVHLELEPGRYLVAEAGVLLAEVRATKFQGGQHFTLVDAGFSDL
MRPSMYGAFHGMSVIPADDEVHPSRATVVAGPLCESGDVFTQAEGGVVLTRELPEARVGD
LLVLHDAGAYGASMSSNYNSRPLAAEVLVTGKTHRLIRRRQTIEELLALENA
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgaaccctttttccagcacccttttgcgcgacctcgccaccgaatacggcacccctttg
tgggtctacgatgccgccaccatccgccagcgcatcaacgatctgaagcgtttcgacacg
gtgcgctttgcccagaaggccaactccaacctgcatttgctgcgcctgatgcgcgatcag
ggcgtggtggttgacgcggtttcgcgcggtgaaatcgagcgtgcccttgcggccgggttc
accgccgcgcccaacgcacaaggtgccagcggtatcgtgttcaccgccgacctgtttgac
catgccacgctggatacggtggtgcagcacgctgttccggtcaacgcaggctccatcgac
atgctcggccagctcggccagcgctccaaaggccaccgcgtctggctgcgcatcaacccg
ggttttggccatggccacagcaacaaaaccaacaccggcggcgagcacagcaagcacggc
atctggcacaccgaactgcccgccgcactggcggccgtaaaagaacacggcttgcacctg
gtgggtctgcacatgcacatcggctcaggcgtcgactatgggcaccttgaagaggtctgc
gccgccatggtgacactggtgaaaaactgcggcgccgatctcgaggccatctcggcgggc
ggcggcttgtccattccctaccaggccgacgagccccatatcgacaccgatcactatttc
agcctgtgggacgccgcgcgccgcgaaatcgccagccacctgggccacgccgtgcacctg
gaactggagcccggccgctacctcgtggcggaagcgggtgtgttgctggccgaggtgcgc
gccaccaaattccagggaggccagcatttcaccctggtagatgccggtttttccgacctg
atgcgcccttccatgtacggcgctttccacggcatgagcgtgatccctgctgacgacgaa
gtgcaccccagccgcgccacggtggtcgccggtccgctgtgcgaatcaggcgacgttttt
acgcaagccgaaggcggcgtggtcctcacacgcgaactgcccgaagcccgggtgggcgac
ctgctggtgctgcacgatgcaggcgcctacggggcttcgatgtcgagcaactacaacagc
cgcccgctcgccgccgaagtgctggtaacgggcaaaacacaccgattgattcgccgccgc
cagaccatcgaagaattgctggcactggaaaacgcatga

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