Hydrogenophaga crassostreae: LPB072_17335
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Entry
LPB072_17335 CDS
T04505
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00300
Lysine biosynthesis
hyl00470
D-Amino acid metabolism
hyl01100
Metabolic pathways
hyl01110
Biosynthesis of secondary metabolites
hyl01120
Microbial metabolism in diverse environments
hyl01230
Biosynthesis of amino acids
Module
hyl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LPB072_17335
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LPB072_17335
Enzymes [BR:
hyl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LPB072_17335
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AOW14338
UniProt:
A0A167IV52
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All DBs
Position
3776780..3778018
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AA seq
412 aa
AA seq
DB search
MNPFSSTLLRDLATEYGTPLWVYDAATIRQRINDLKRFDTVRFAQKANSNLHLLRLMRDQ
GVVVDAVSRGEIERALAAGFTAAPNAQGASGIVFTADLFDHATLDTVVQHAVPVNAGSID
MLGQLGQRSKGHRVWLRINPGFGHGHSNKTNTGGEHSKHGIWHTELPAALAAVKEHGLHL
VGLHMHIGSGVDYGHLEEVCAAMVTLVKNCGADLEAISAGGGLSIPYQADEPHIDTDHYF
SLWDAARREIASHLGHAVHLELEPGRYLVAEAGVLLAEVRATKFQGGQHFTLVDAGFSDL
MRPSMYGAFHGMSVIPADDEVHPSRATVVAGPLCESGDVFTQAEGGVVLTRELPEARVGD
LLVLHDAGAYGASMSSNYNSRPLAAEVLVTGKTHRLIRRRQTIEELLALENA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctttttccagcacccttttgcgcgacctcgccaccgaatacggcacccctttg
tgggtctacgatgccgccaccatccgccagcgcatcaacgatctgaagcgtttcgacacg
gtgcgctttgcccagaaggccaactccaacctgcatttgctgcgcctgatgcgcgatcag
ggcgtggtggttgacgcggtttcgcgcggtgaaatcgagcgtgcccttgcggccgggttc
accgccgcgcccaacgcacaaggtgccagcggtatcgtgttcaccgccgacctgtttgac
catgccacgctggatacggtggtgcagcacgctgttccggtcaacgcaggctccatcgac
atgctcggccagctcggccagcgctccaaaggccaccgcgtctggctgcgcatcaacccg
ggttttggccatggccacagcaacaaaaccaacaccggcggcgagcacagcaagcacggc
atctggcacaccgaactgcccgccgcactggcggccgtaaaagaacacggcttgcacctg
gtgggtctgcacatgcacatcggctcaggcgtcgactatgggcaccttgaagaggtctgc
gccgccatggtgacactggtgaaaaactgcggcgccgatctcgaggccatctcggcgggc
ggcggcttgtccattccctaccaggccgacgagccccatatcgacaccgatcactatttc
agcctgtgggacgccgcgcgccgcgaaatcgccagccacctgggccacgccgtgcacctg
gaactggagcccggccgctacctcgtggcggaagcgggtgtgttgctggccgaggtgcgc
gccaccaaattccagggaggccagcatttcaccctggtagatgccggtttttccgacctg
atgcgcccttccatgtacggcgctttccacggcatgagcgtgatccctgctgacgacgaa
gtgcaccccagccgcgccacggtggtcgccggtccgctgtgcgaatcaggcgacgttttt
acgcaagccgaaggcggcgtggtcctcacacgcgaactgcccgaagcccgggtgggcgac
ctgctggtgctgcacgatgcaggcgcctacggggcttcgatgtcgagcaactacaacagc
cgcccgctcgccgccgaagtgctggtaacgggcaaaacacaccgattgattcgccgccgc
cagaccatcgaagaattgctggcactggaaaacgcatga
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