Hydrogenophaga crassostreae: LPB072_20280
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Entry
LPB072_20280 CDS
T04505
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00280
Valine, leucine and isoleucine degradation
hyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LPB072_20280
Enzymes [BR:
hyl01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
LPB072_20280
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
ATP-grasp
Biotin_lipoyl_2
HlyD_3
Dala_Dala_lig_C
LAL_C2
HlyD_D23
RnfC_N
GCV_H
NQRA_N
ATP-grasp_4
GARS_A
DUF2118
Motif
Other DBs
NCBI-ProteinID:
AOW14805
UniProt:
A0A162SR34
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All DBs
Position
complement(4377588..4379609)
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AA seq
673 aa
AA seq
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MFSKILIANRGEIACRVAATARRMGVRTVAVYSDADANAKHVAACDESVHIGGSAPKDSY
LQWERILQAAKDTGAQAVHPGYGFLSENDAFADACAKAGLVFIGPPSSAILAMGLKAESK
QLMEKAGVPLVPGYHGADQDPALLQREADRIGYPVLIKASAGGGGKGMRAVDKAEDFAAA
LASCQREARNSFGSDAVLVEKYVQRPRHIEIQVFGDTLGNCVYLFERDCSVQRRHQKVLE
EAPAPGMTEKLRAEMGAAAVAAAQAVNYVGAGTVEFIVEQPGGYEKPEDMKFFFMEMNTR
LQVEHPVTEAITGLDLVEWQLRVASGEALPLKQEDLRIHGHAIEARICAETPDNQFLPAT
GRLDVYRKPAHTTFERGSVRVDDGVREGDAISPFYDSMVAKLIVHGDTRAEALARMDAAL
AETRIVGLSTNVQFLRHVVGSASFARAELDTALIPREASALFDQDRVGRPLAVAAAVAQT
LLGERAGEGADPFSRTDGWRPYGLTVRRFDFVYRGEALQAALTYLHDGALHLAVGNDAPS
LLVFSALPADSGSLMDVQFNGQRQTVQTWQRNELVHVFCDLGATVITEIDALAHAGEVAA
EGGRLTAPMPGKVVSFGVKAGDVVKKGQALAVMEAMKMEHTIAAPADGTVAELLYAPGDQ
VAEGAELLKLQTA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaaaattctgattgccaaccgcggtgaaattgcttgccgtgtggccgctacc
gcccgccgcatgggtgtgcgcaccgtggccgtgtattccgatgccgatgccaatgccaag
catgtggccgcatgtgacgagtcggtgcacatcggcggcagcgcgcccaaagacagctac
ctgcaatgggagcgcatcttgcaggcggccaaagacacgggcgcgcaagcggtgcatccg
ggctacggctttctgagcgagaacgatgccttcgccgacgcctgtgccaaggcgggtctg
gtgttcatcggccctccgtcgtcggcgattttggccatgggcctgaaggccgagtccaag
caactgatggaaaaggccggcgtgcccctggtgcccggttaccacggtgccgaccaagac
cccgccttgctgcagcgcgaggccgaccgcattggctaccccgtgctcatcaaggccagc
gccggtggcggcggcaagggcatgcgcgcggtggacaaggccgaagactttgcagcggcc
ctggccagctgccagcgcgaagcccgcaacagcttcggcagcgatgcggtgctggttgaa
aaatacgtgcaacgcccgcgtcacatcgagattcaggtgtttggtgacaccctcggcaat
tgtgtgtatctgtttgagcgtgactgctcggtgcagcgccgccaccagaaggtgctggaa
gaagcgccagcgcccggcatgacggaaaaactgcgcgccgaaatgggtgcggcggcggtg
gctgcggcccaggcggtgaactacgtgggtgcgggcaccgtggaattcatcgtggagcag
ccgggcggttacgaaaaacccgaagacatgaagttcttcttcatggaaatgaacacgcgt
ttgcaggtggagcatccggtcaccgaagccatcacggggctcgatctcgtggagtggcag
ttgcgtgtggcttcgggggaagcgctgccgctcaagcaggaagatttgcgcatccacggc
catgcgatcgaggcgcgcatctgcgccgagacgcccgacaaccagttcctgcccgcaacg
gggcggcttgatgtgtaccgcaagcccgcacacaccacgtttgagcgcggctcggttcgg
gtggacgatggcgtgcgcgaaggtgacgccatcagcccgttttacgactccatggtggcc
aagctcatcgtgcacggtgatacccgcgccgaggcgctggcgcgcatggacgcggcgctg
gccgaaacgcgcattgttggtttgtcgaccaacgtgcagttcctgcgccatgtggtgggc
agcgcctcgtttgccagggccgaactcgataccgcattgatcccgcgcgaggcctcggcg
ttgtttgatcaagaccgggtgggccgcccgctggccgtggcggctgcggtggcgcaaacg
ctgctgggtgaacgcgctggcgagggcgccgacccgttctcgcgcaccgatggctggcgc
ccctatgggctcacggttcggcgctttgattttgtataccggggcgaagccttgcaagct
gcgttgacgtatttgcatgacggggcattgcatttggctgtgggcaatgacgcgccgtcg
ctgttggtgttttcggcgttgcctgccgacagcggcagcttgatggatgtgcaattcaac
ggacaacgccagacggtgcagacctggcagcgcaacgaactggtgcatgtcttctgtgac
ctgggtgccacggtcattaccgaaatcgacgccttggcccatgcgggcgaagtcgcggcc
gaaggcgggcggctcaccgcacccatgcccggcaaggtggtgtcgtttggcgtcaaggca
ggcgacgtggtcaagaaggggcaggccctggcggtgatggaggccatgaagatggagcac
accatcgccgcgcccgccgacggcacggtcgccgagctgctgtacgcgcctggcgatcag
gtcgccgaaggggcggagttgctgaagttgcaaaccgcttga
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