Hydrogenophaga crassostreae: LPB072_20920
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Entry
LPB072_20920 CDS
T04505
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00470
D-Amino acid metabolism
hyl00550
Peptidoglycan biosynthesis
hyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LPB072_20920
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LPB072_20920
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyl01011
]
LPB072_20920
Enzymes [BR:
hyl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LPB072_20920
Peptidoglycan biosynthesis and degradation proteins [BR:
hyl01011
]
Precursor biosynthesis
Amino acid ligase
LPB072_20920
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DAO
F420_oxidored
AlaDh_PNT_C
NAD_binding_8
2-Hacid_dh_C
NAD_binding_2
Pyr_redox_2
Pyr_redox
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AOW14914
UniProt:
A0A167HN45
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Position
complement(4510629..4512482)
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AA seq
617 aa
AA seq
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MNHLKDHRVLILGLGISGLAMARWCARAGASVTVADTRERPPQLTALQEQCPQATFVQGA
FDSALLAQGDWTLVARSPGLAPDTLSEVREWAQQHGVPYWGELDLFAAALHELGQRDPLP
YRPKVLGITGTNGKTTVTSLTGLLLDRSGVNVAIAGNIGPALLDVLSKALDDEAVANAED
QVEADRVAQEAANGPEPMPAPLAEVIEAVPSCESEAGDPEQGALTDDQAREPSAEVGVTD
PASAQAADAEDDGGPLLLVPPPVEPPPPPHLPLVWVLELSSFQLDGVAGGAWSDVPTAAT
VLNISEDHLDWHGSLAAYADTKSAIFGDQALMLLNRDDVATMAFTPPMVTVKISGRNRQQ
PARAWASFGLDAPSRPGDWGLETVNGMTWLVRALAVDETRKKGRGQDEEDEIYFQRLMPA
DALRIRGRHNAANALAALALATSTGATLAPMLHGLREYRGEPHRVEPIAVIEGVEYFDDS
KGTNVGATLAAIQGLGAERKLVLILGGDGKGQDFTPLAPALAQHARAVFLIGRDATAIRT
CIEQALSSASVTLTDAASLPDAVALAASAAQPGDAVLLSPACSSLDQFDNYQHRAQVFVG
AVTELAHAMGVDLEGAL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacctgaaagaccaccgcgtcctcatcctgggcctgggcatctccggtctggcg
atggcgcgctggtgcgcgcgagcaggtgcgtcggtgacggtggctgacactcgcgagagg
ccgccgcagctgaccgcgctgcaggagcagtgtccgcaagccacgtttgtgcagggcgcg
ttcgatagcgcgctgttggcgcagggcgactggacgctggtcgcgcgcagcccgggcttg
gcacctgacacgctgtccgaggtgcgcgaatgggcgcagcaacatggcgtgccttactgg
ggtgaactcgacctgttcgcggcggcgctgcatgagctgggtcaacgcgatccgctgcct
taccgtcccaaggtgttgggcatcacgggcaccaatggcaaaaccacggtgacctctttg
accggtttgttgctggatcgcagtggcgtgaacgtcgccatcgcaggcaacatcgggccg
gccttgctggatgtgctgtccaaggcgctggatgatgaggctgtcgcgaacgcagaagat
caggtcgaagcagaccgggtggcacaagaggccgccaatgggcccgagccgatgcctgcg
cctttggcagaagtgattgaggcggtcccatcatgtgagtccgaagccggtgacccggaa
caaggcgcattgaccgacgatcaggcccgggagccgtctgccgaggtaggggtgactgac
cccgcaagcgcacaggcggcagacgcggaagacgacggtggaccattgttgctggtgcca
ccgccggtcgagccaccaccaccgccccacttgccattggtatgggtgttggagctttcc
agcttccagctggacggggtggctgggggagcctggagcgacgtgccaacggcggccacg
gtgctgaatatttcggaagaccatctggactggcatggctccctggctgcctatgccgac
acgaagtcggccatttttggcgatcaggcgctgatgctgctcaatcgggacgatgtggcc
acgatggccttcacccctccgatggtgaccgtcaagatcagtggccgaaaccgccagcag
cctgcacgagcttgggccagtttcggtctggatgcgccgagccggccaggcgactggggt
cttgaaacggtcaatggcatgacttggctggtgcgcgcgcttgcggtggacgaaacccgc
aagaagggtcgcggccaggacgaagaagacgagatctatttccagcgcctgatgcccgcc
gatgcgctgcgcatccgcgggcgtcacaacgccgccaatgccctggccgcgctggcactg
gcgacatcaacgggtgcaacgctcgcacccatgctgcatggcttgcgggaataccgtgga
gagccacaccgtgttgaaccgatagcggtgatcgagggcgtggagtatttcgacgacagc
aagggcaccaacgtgggcgccactctggccgccattcagggcctgggcgctgagcggaag
ctggtcctgatactgggtggcgatggcaagggacaggatttcacgcctttggcaccggcg
ttggcgcagcatgcgcgcgcggtgttcttgatcggacgcgacgcaactgccattcgcacc
tgcattgaacaagccttgtcatcggcctccgtgaccttgacggatgccgcaagtttgccc
gacgctgttgcgctggctgcctctgccgcccagccgggtgatgcggtgctgctgtcaccc
gcttgctcaagtctggatcagttcgacaattaccagcaccgtgcacaggtgttcgtcggg
gcggtcaccgaactggcacacgcaatgggtgtcgatctggagggcgcgctgtga
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