Hydrogenophaga crassostreae: LPB072_21135
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Entry
LPB072_21135 CDS
T04505
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl00061
Fatty acid biosynthesis
hyl00071
Fatty acid degradation
hyl01100
Metabolic pathways
hyl01212
Fatty acid metabolism
hyl02024
Quorum sensing
hyl04146
Peroxisome
Module
hyl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LPB072_21135
00071 Fatty acid degradation
LPB072_21135
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LPB072_21135
09145 Cellular community - prokaryotes
02024 Quorum sensing
LPB072_21135
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hyl01004
]
LPB072_21135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hyl04147
]
LPB072_21135
Enzymes [BR:
hyl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LPB072_21135
Lipid biosynthesis proteins [BR:
hyl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LPB072_21135
Exosome [BR:
hyl04147
]
Exosomal proteins
Exosomal proteins of breast milk
LPB072_21135
Exosomal proteins of breast cancer cells
LPB072_21135
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AOW15884
UniProt:
A0A162SXZ1
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All DBs
Position
4560447..4562306
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AA seq
619 aa
AA seq
DB search
MSYLWDLSAIQPQPNVVMQGDTMPAVFWHAVKARGPKVWMRQKDFGIWRTWTWNQTGDAV
RDIGHGLMSLGFESRETASILSNTNIEWVLCDLAVLSANGVSNGIYPTDAAEQVEYLCQD
SSTTVLFVEDDEQLDKVLAVREQLPKLKKIVVFDMEGLRDFDDPQVISLDDLRALGREHL
KHNPEALNQRTAACKPEDLAILVYTSGTTGRPKGAMHSHHGLVYTVRGYNTLIARDENDE
CMCFLPLCHIAERMGGEYFSLYTGAKLNFVENPETVPENVREIAPTVFTAVPRVWEKFYS
GVMISLKEAGAVQQAAYAWAIGVGQRVADQVLKGETISEGLKLQFRIARLLALNNVRKLI
GIHRARFLVTGAAPISPELVRWYLALGLPMLEVWGMTETCGASTGIPADRIKPGSIGPAA
DYNEVRIDPLTGEILVRGPNVFMGYLNLPEKTAETIDKEGWLHTGDVGLVDEEGFFRITD
RMKDIIITAGGKNITPSELENELKFSPYVTDAVVIGDKLPYLTVIIMIDQENVEKFAQDN
DVPFSNYASLTRAPEVQQVIQDVIDGVNKKFARVEQIKKFFLLDTQLSAEDEELTPTMKL
KRKLVQEKYAPQIQAMYAK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagctacctctgggatctttccgcgattcagccgcagcccaacgtggtgatgcaaggc
gacaccatgcctgctgttttctggcacgccgtgaaagcgcgcggacccaaggtgtggatg
cgccagaaagacttcggtatctggcgcacctggacctggaaccagacgggcgatgccgtg
cgcgacatcggccatggcctgatgtccctgggctttgaatcacgcgagacagcgtcgatc
ctgtccaacaccaacatcgaatgggtgttgtgcgacctcgcggtgttgagcgccaacggt
gtgtccaacggtatctatcccacggatgcggccgagcaggtcgagtacctctgccaggac
tcttcgaccaccgtgctgtttgtggaagacgacgaacaactcgacaaggtgctggcggtt
cgcgagcagttgcccaagctcaaaaaaatcgttgtgttcgacatggagggcctgcgcgat
ttcgacgatccgcaagtcatcagcctggatgacctgcgcgcgctgggccgcgagcacctg
aagcacaaccctgaagcgctgaaccagcgcacagcggcctgcaagcccgaagacctggcc
attctggtctacacctcgggcaccaccgggcggcccaaaggcgccatgcacagccaccat
ggactggtctacaccgtgcggggctacaacacgctcatcgcgcgcgacgaaaacgacgag
tgcatgtgctttctgccgctgtgccacatcgccgagcgcatgggcggcgagtatttttcg
ctctacaccggcgccaagctcaacttcgtcgagaaccccgaaaccgtgcccgagaacgtg
cgcgagatcgcgcccacggtgttcaccgccgtgccgcgcgtgtgggagaagttctattca
ggcgtgatgatttcgctcaaggaggctggcgcggttcagcaggccgcttacgcctgggcc
attggtgtgggtcagcgcgtggccgatcaggttttgaagggtgaaaccatttcagagggg
ttgaaactgcaatttcggatagcgcgcctgctggcgctcaacaacgtgcgcaagctcatc
ggcatccacagggcgcgtttcctggtcacgggtgccgcgcccatttcccccgaactggtg
cgctggtatctggcgctgggtctgcccatgctcgaagtctggggcatgaccgaaacctgc
ggcgcttctaccggcattcccgccgacagaatcaagccgggctccattggccctgccgcc
gactacaacgaagtgcgcatcgatccgctcacaggcgaaattcttgtgcgcgggccaaat
gtgttcatgggctacctcaacctgcccgagaagaccgccgagaccatcgacaaagaaggc
tggctgcacacgggcgacgtgggcctggtcgatgaggaagggtttttccgcatcaccgac
cgcatgaaagacatcatcattaccgcaggcggtaaaaacatcacaccgagcgaactggaa
aacgagttgaagttttcaccctacgtcaccgacgcagtggtgattggcgacaagttgccc
tacctcaccgtgatcatcatgatcgatcaggagaacgtcgagaaatttgcgcaagacaac
gacgtgcccttctcgaactacgccagcctcacccgtgcgccagaggtgcagcaggtgatt
caggacgtgattgatggtgtgaacaagaaatttgcccgggtcgaacagatcaaaaagttc
ttcctgctcgatacccagctcagcgccgaagacgaggaactcacccccaccatgaagctc
aaacgcaagctggttcaagaaaaatacgctccccagattcaggccatgtacgccaaatag
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