Hydrogenophaga crassostreae: LPB072_21270
Help
Entry
LPB072_21270 CDS
T04505
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl03030
DNA replication
hyl03430
Mismatch repair
hyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB072_21270
03430 Mismatch repair
LPB072_21270
03440 Homologous recombination
LPB072_21270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyl03032
]
LPB072_21270
03400 DNA repair and recombination proteins [BR:
hyl03400
]
LPB072_21270
Enzymes [BR:
hyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB072_21270
DNA replication proteins [BR:
hyl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB072_21270
DNA repair and recombination proteins [BR:
hyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB072_21270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOW14973
UniProt:
A0A162P558
LinkDB
All DBs
Position
complement(4592466..4593233)
Genome browser
AA seq
255 aa
AA seq
DB search
MDLRRAAVFHPKLLSQPGAVATAETDWRKRFEALALSARDERLRAYYAAGMVGGDTPLSA
VPLMALDVETTGLDPVKDGMVSIGLVPMNLERIRASASRHWILKPRVPLGEASVTIHGIT
DSQVMAAPDLKQVLGEVLQAMAGHVLVVHCRDIERQFLNGALRPRIGEGIAFPVIDTMEL
EARLHRNQPRGWLNWALGRHPPQASIRLVDSRARYNLPRYRPHHALTDALASAELLQAQV
AHRFSPDTPVRELWS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atcgacctgaggcgggccgccgtgtttcatcccaaactgctcagccagccgggtgccgtc
gccacggctgaaaccgattggcgcaaacgttttgaagcattggcgctgagcgctcgcgat
gaacggttgcgggcttactacgcagcgggcatggtgggtggcgatacaccgctgtcggcg
gtgccgctgatggcgctggacgtggaaaccacggggctcgaccccgtcaaagacggcatg
gtcagcatcggcctggtgcccatgaacctggagcgcatccgggccagtgcttcgcgccac
tggattctgaaacctcgcgtgccgctgggtgaagcgtcggtcaccatccatggcatcacc
gattcccaggtgatggctgcgccggatctcaagcaagtgctgggcgaggtgttgcaggcc
atggcgggccatgtgctggtggtgcactgccgcgatattgagcgccagtttctcaacggg
gcattgcgcccgcgcatcggcgagggcattgctttcccggtgatcgacaccatggagctg
gaggcccgactgcaccgcaaccagcccaggggctggctcaattgggccttggggcgccat
ccgccgcaagcctccattcgactggtcgacagccgggcccgctacaacctgccgcgctac
cggccgcaccacgcgctcaccgatgcgctggcctcggctgagttgctgcaagcgcaggtg
gcacaccgcttttcccccgacacgccggtgcgtgaactctggtcttag
DBGET
integrated database retrieval system
