Hydrogenophaga crassostreae: LPB072_21420
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Entry
LPB072_21420 CDS
T04505
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyl03009
]
LPB072_21420
Enzymes [BR:
hyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LPB072_21420
Ribosome biogenesis [BR:
hyl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LPB072_21420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Methyltransf_31
Methyltransf_37
Methyltr_RsmF_N
Cons_hypoth95
Methyltransf_11
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AOW15896
UniProt:
A0A167I6D7
LinkDB
All DBs
Position
complement(4624193..4625494)
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AA seq
433 aa
AA seq
DB search
MATQLKWVGQSVLAVEKGRSLTEVLPGVPGALRPGVQALTFEVLRHLGAARALAKQLAQR
APAPPALALLHSALAILVGDEGRARYADHTLVDQAVEAAKQSRDTRMQAGFLNACLRRFL
RERASLLQAIESDPVARWNHPEWWVDRVKADHPDHWQSVLNASQTPGPMVLRVNRRKQTR
EAYRMVLSSQGLDALPLGDDGLVLTKPVPVEQLPGFAQGSCSVQDGAAQIAAGLLLGGRE
WSGRDRVLDACAAPGGKTAHLLEQSSATVLALDLDPRRCQRIHDNLQRLGLSAEVKAADA
ALPADWWDGQLFDAVLLDAPCTASGIVRRHPDARWLRRSSDIPQLALIQARMLEALWPLL
KPGGRMVYATCSIFRAEGADQVQAFLARHNDAVEQPSPGHLLPGDARIHGEFNDNVSGGY
DGFFYARLDKALP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ctggcaacccaattgaagtgggtggggcaaagtgtgttggccgttgaaaaaggacgctcg
ttgaccgaggtgttgcctggcgtgcctggcgcgttgcgcccaggcgtgcaagcgctcaca
tttgaggtgttaaggcatttgggcgcagccagggctttggccaaacagctggcgcaacgc
gcaccggccccgcctgcgctggctctgctgcattcggccctggcaatcctggttggcgat
gaagggcgcgcgcgctatgctgatcacactttggtcgatcaagcggtagaggctgccaag
caatcgcgcgacacgcgtatgcaagcggggtttttgaatgcgtgcttgcgccgttttttg
cgggagagggccagcctgcttcaggcaattgaatccgatcctgtggcgcgctggaatcat
cccgagtggtgggtcgatcgcgtcaaggccgatcacccagaccactggcagtcggtattg
aatgccagccaaacgccgggaccgatggtattgcgggtcaatcgacgcaaacagacccgc
gaagcctacaggatggtgctctcctctcaaggcttggatgccttgccgttgggggatgac
ggcctggttttgaccaagccggtgcccgtggagcaactgccgggttttgcccagggctcc
tgttctgtgcaggatggtgccgcgcagatcgcggccggcttgttgctgggtggtcgcgaa
tggagtggtcgtgacagggtgctggacgcttgtgctgcacccggtggcaaaacagctcac
ctgcttgagcaatccagcgccacagtgctggcgttggatcttgatccgcgacggtgccag
cgcattcacgacaatctgcaacggctgggcttgagtgccgaagtgaaagccgctgatgcg
gcgctgcctgcagattggtgggacggccagctgtttgatgcggtgttgctggatgcgccc
tgtacggcctcgggcatcgttcgccgccatcccgatgcgcgttggctgcgccgcagcagc
gatattccccaactggcgttgattcaggcccggatgctggaggccctgtggccgctgctc
aagcccggagggcgaatggtctacgcgacctgctcgattttccgggccgaaggggctgat
caggtgcaggcgttccttgcgcgccacaacgatgcggttgagcaaccctcaccagggcat
ttgctccccggtgacgctcgtattcatggggagttcaacgacaatgtgtcgggtggatac
gacgggttcttttacgcacgactggacaaggcgctgccttga
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