Hydrogenophaga crassostreae: LPB072_21500
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Entry
LPB072_21500 CDS
T04505
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB072_21500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyl03400
]
LPB072_21500
Enzymes [BR:
hyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LPB072_21500
DNA repair and recombination proteins [BR:
hyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPB072_21500
Prokaryotic type
LPB072_21500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOW15003
UniProt:
A0A167GH81
LinkDB
All DBs
Position
complement(4641620..4642381)
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AA seq
253 aa
AA seq
DB search
MPGARAGQRLLHWGEEPDPAAAPLWLTAVDPKAWPVAPDWQASVDAFWAEKVGQGLLHFL
DGRLKAGAVIYPPEPLRALALTAPADVRVVILGQDPYHGPGQAEGLAFSVAPGIRLPPSL
RNVFKELLRDLGLAPPSNGSLVRWAKQGVLLLNTCLTVEDGQPASHAGKGWESLTDTVIR
CCSDRGPPKVFLLWGAHAQKKSVLIDGKRHCVLSANHPSPLSASRGPAPFFGCGHFSKTN
RWLSEAGETEIHW
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcccggagcgcgcgctgggcaacgccttttgcattggggtgaggagcccgatcctgcc
gcagcaccactgtggttgacggccgtggatcccaaggcttggccggtggcgccagattgg
caggcgtcggtagacgctttttgggccgaaaaagtcggacaggggctgttgcactttttg
gatgggcgcctgaaagccggggcggtgatctatccacctgagccgctcagggccttggcg
ctcacagccccggcagacgtgcgcgtggtgattctgggccaagacccataccacggccca
ggtcaggccgaaggcctggcgttttcggtggcgccggggatcaggttgccccccagcttg
cgcaatgtgttcaaagaattgctgcgcgatctgggattggctcccccctccaatggctcc
cttgtgcgatgggccaagcagggtgtgttgcttctcaatacctgtctgacagtcgaggac
ggacagccggccagccacgcggggaagggctgggagtctttgaccgacaccgtgattcgt
tgctgcagcgatcgaggtccccccaaggtatttttgctctggggcgcgcatgcccagaaa
aagtctgttttgatcgatggcaagcgccactgcgtgttgtctgccaatcacccatcaccc
ctgtcggccagccgcggtcccgcaccgtttttcggttgcggacacttttccaagaccaat
cggtggctgtcggaggccggcgaaacagaaattcattggtga
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