Hydrogenophaga crassostreae: LPB072_22635
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Entry
LPB072_22635 CDS
T04505
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyl03019
]
LPB072_22635
03016 Transfer RNA biogenesis [BR:
hyl03016
]
LPB072_22635
Enzymes [BR:
hyl01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
LPB072_22635
Messenger RNA biogenesis [BR:
hyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LPB072_22635
Transfer RNA biogenesis [BR:
hyl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LPB072_22635
Prokaryotic type
LPB072_22635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
AOW15187
UniProt:
A0A1D8P1F1
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All DBs
Position
4886163..4886468
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AA seq
101 aa
AA seq
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MPGSAVASLAVAGLPAQGNEVLVMIRQGGPFRYEKDGTVFGNRERLLPSQKRGYYREYTV
PTPGLSHRGARRIVCGGQQPKRPDACFYTDDHYSSFRLIVE
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
ttgcccggctcagcggttgcctcgttggcggttgctggcttaccggctcagggcaatgaa
gtcttggtcatgattcggcaaggtgggcctttccggtacgaaaaagatggcacggtgttt
ggcaaccgggagcgtttgctccccagccagaaacggggttactaccgggagtacacggtg
cccacaccagggttgagtcatcggggagcgcgccgcatcgtatgcggcggccaacagccc
aagcggcccgatgcatgtttttataccgacgaccactacagcagctttcggttgattgtg
gagtga
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