Hymenobacter sp. APR13: N008_05460
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Entry
N008_05460 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym00550
Peptidoglycan biosynthesis
hym01100
Metabolic pathways
hym01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N008_05460
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N008_05460
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hym01011
]
N008_05460
Enzymes [BR:
hym01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
N008_05460
Peptidoglycan biosynthesis and degradation proteins [BR:
hym01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
N008_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AII51432
LinkDB
All DBs
Position
complement(1258735..1260573)
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AA seq
612 aa
AA seq
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MQYLEGRRFVVLAIFLAVALTFGGRLFYIQVLDGSYKLAADRNTLQRIVQVPYRGLIYDR
KGQLLVQNMPVYDLMVVPREVKQLDTARFCQLLQLPLEEVRLGLQTARAYSRVKASPLVQ
NLSTPELAAIQDNLIDFPGFSIKARMARSYRTENMAHALGYVGAITPAFLEKEKYAKYLP
GDFLGISGLESFYEPQLMGRRGVQYRMVNVRGIEKGSFRDGEYDTLSVAGQDLHTSIDIE
LQKYGEMLMQNKRGSIVALDPKTGEILAMVSAPGFEPSVLTGKGMGNRYMALLQDTAKPL
FNRPLMATYPPGSVFKMVNELVALQMGVVTPNTPFDCNWKLVRCTHRHEYPHNVSIAIKN
SCNPYFYQVMRAAVLRGRSTNRFEDARLGYSEWRRQVMTFGLGDKLGVDISQEKKGLIPT
SDFYDKAYGFHRWNFRTIYSLAIGQGEMGVTGLQMANMLAIIANRGYYYTPHFVKGIGTG
GPLPQYLQRHVTAVDPQYFESIVPGMQQVVDGRGGTGNNASLLDVGISVAGKTGTVQNRH
GADHATFAAFAPAEDPKIAIAVFIENAGFGGSSAAPMAALMMEKYLRGDVAPWRKRWETW
LQRPAESFIRKY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatacctagaagggcgccggtttgtggtgctggctatttttctggccgtagccctc
acgtttggggggcggcttttctacattcaggtgctggatggcagctacaagctggccgcc
gaccgcaacacgctgcagcgcatcgtgcaggtgccctaccgcggcctcatctacgaccgc
aagggccagctgctggtgcagaatatgcctgtgtacgacctgatggtggtgccacgcgag
gtgaagcagctggacacggcccgcttctgccagctgctgcagctgccgctggaagaggtg
cgcctgggtttgcagacggcccgcgcctactcccgcgtgaaggcctcgccgctggtgcag
aacctgagcacgcccgagctggccgccatccaggacaacctcatcgactttccgggcttc
agcatcaaggcccgcatggcgcgctcctaccgcaccgaaaacatggcccacgccctgggc
tacgtgggcgccatcacgccggcgtttctggaaaaggaaaagtacgccaagtacctgccc
ggcgactttctgggcatttcggggctggagtcgttttatgagccgcagctgatggggcgg
cgcggcgtgcagtaccgcatggtgaacgtgcgcggcatcgagaaaggctcgttccgcgac
ggcgagtacgacacgctgtcggtggccgggcaggacctgcacaccagcatcgacatcgag
ctgcagaagtacggcgagatgctgatgcagaacaagcgcggctccatcgtggccctcgac
cccaagaccggcgaaatcctggccatggtgtcggcaccgggcttcgagccgtcggtgctg
accggcaagggcatgggcaaccgctacatggccctgctgcaggacacggccaaacccctg
ttcaaccgcccgctgatggccacctacccgccgggttcggtgtttaagatggtgaacgag
ctggtggcgctgcagatgggcgtcgtgacgcccaatacgccgtttgactgcaactggaag
ctggtgcgctgcacccaccgccacgagtacccgcacaacgtcagcattgccatcaaaaac
agctgcaacccctatttctaccaggtgatgcgggcggccgtgctgcgcgggcgctccacc
aaccgcttcgaggatgcccgcctgggttacagcgagtggcgccggcaggtgatgaccttc
gggctgggcgacaagctgggcgtggacatctcgcaggaaaagaagggcctcatcccgact
tccgacttctacgacaaagcctacggcttccaccgctggaacttccgcaccatctactcg
ctcgccatcgggcagggcgaaatgggcgttacggggctgcagatggccaatatgctggcc
atcattgccaaccgcggctactactacacgccgcactttgtgaagggcatcggtacgggc
ggcccgctgccgcagtacctgcagcggcacgtcacggccgtcgatccgcagtactttgaa
tccattgtgccgggcatgcagcaggtagtggacggccgcggcggcaccggcaacaatgcc
tcgctactggacgtgggcatttcggtggccggcaaaacgggcaccgtgcaaaaccgccac
ggcgccgaccacgccaccttcgccgccttcgcgcccgccgaagaccccaagattgccatt
gccgtattcatcgaaaatgccggtttcgggggctcctccgccgcccccatggccgccctg
atgatggagaaatacctgcgcggtgacgttgccccctggcgcaagcgctgggaaacctgg
ctgcagcgccccgctgaaagctttatccgaaaatattaa
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